HHsearch alignment for GI: 254780276 and conserved domain: PRK13111
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional.
Probab=92.93 E-value=0.93 Score=26.13 Aligned_cols=124 Identities=23% Similarity=0.283 Sum_probs=67.9
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCC------------------CCHHHHHHHHHHHHHHHCCCC--EEEE
Q ss_conf 36741027899997534321024432001234334------------------317889999999875302330--1210
Q gi|254780276|r 75 AGIGSNNTRESVELAQYAHSIGADALLVVIPYYNK------------------PNRRGLLAHFGEIATTVSSPI--YIYN 134 (292)
Q Consensus 75 ~gv~~~~~~~~i~~a~~a~~~Gad~i~v~~P~~~~------------------~~~~~i~~~~~~i~~~~~~pi--~iYn 134 (292)
T Consensus 15 ~taG~P~~e~~~~~~~~l~~~Gad~iEiGiPfSDP~aDGpvIq~a~~~AL~~G~~~~~~f~~~~~~r~~~~~pivlM~Y~ 94 (256)
T PRK13111 15 ITAGDPDLETSLEILKALVEAGADIIELGIPFSDPVADGPVIQRASLRALAAGVTLADVLELLREIRAKPTIPIVLMTYY 94 (256)
T ss_pred EECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEEC
T ss_conf 70708998999999999996599999978887887665799999999999779969999999999860689988998503
Q ss_pred CHHHCCCCCCHHHHHHHHHHCCHHHHHHCCCCCH-----HHHHHHHHHCCCCEEECCC--CCCCHHHHHHHCCCCCC
Q ss_conf 0111112111068999743203023310012211-----3589999735984032013--22100124320334455
Q gi|254780276|r 135 NPSRTVIEMDVDTMAELAATYPNIVGVKDATGKI-----ELVSEQRLSCGFDFIQLSG--EDSSALGFNAHGGVGCI 204 (292)
Q Consensus 135 ~P~~~g~~~~~~~l~~L~~~~pni~giK~~~~~~-----~~~~~~~~~~~~~~~v~~G--~~~~~~~~~~~G~~G~i 204 (292)
T Consensus 95 N~i~---~~G~e~F~~~~~~~-GvdGvIi--pDLP~eE~~~~~~~~~~~gi~~I~lvaPtt~~~Ri~~i~~~s~gfi 165 (256)
T PRK13111 95 NPIF---QYGVEAFAADAAEA-GVDGLII--PDLPPEEAEEFRAAAKKHGIDLIFLVAPTTTDERLKKIASHASGFV 165 (256)
T ss_pred CHHH---HHCHHHHHHHHHHC-CCCEEEE--CCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCEE
T ss_conf 0898---70999999999975-9977981--6999788899999999759808999699998899999996269859