HHsearch alignment for GI: 254780276 and conserved domain: cd00377
>cd00377 ICL_PEPM Members of the ICL/PEPM enzyme family catalyze either P-C or C-C bond formation/cleavage. Known members are phosphoenolpyruvate mutase (PEPM), phosphonopyruvate hydrolase (PPH), carboxyPEP mutase (CPEP mutase), oxaloacetate hydrolase (OAH), isocitrate lyase (ICL), and 2-methylisocitrate lyase (MICL). Isocitrate lyase (ICL) catalyzes the conversion of isocitrate to succinate and glyoxylate, the first committed step in the glyoxylate pathway. This carbon-conserving pathway is present in most prokaryotes, lower eukaryotes and plants, but has not been observed in vertebrates. PEP mutase (PEPM) turns phosphoenolpyruvate (PEP) into phosphonopyruvate (P-pyr), an important intermediate in the formation of organophosphonates, which function as antibiotics or play a role in pathogenesis or signaling. P-pyr can be hydrolyzed by phosphonopyruvate hydrolase (PPH) to from pyruvate and phosphate. Oxaloacetate acetylhydrolase (OAH) catalyzes the hydrolytic cleavage of oxaloacetate to
Probab=97.52 E-value=0.0019 Score=45.69 Aligned_cols=122 Identities=18% Similarity=0.216 Sum_probs=82.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEEECCCC--------CCHHCCCHHHHHHHHHHHHHCCCC--CCCCCCCC-----CCCHHHH
Q ss_conf 89999999999997699899986723--------250108999999986543110123--44300367-----4102789
Q gi|254780276|r 20 DEDAFVEHIEWQITEGSGGLVPAGTT--------GESSTLSHEEHCRIIELCVKTVAS--RVPVMAGI-----GSNNTRE 84 (292)
Q Consensus 20 D~~~~~~~i~~l~~~gv~gi~~~G~t--------GE~~~Ls~~Er~~~~~~~~~~~~~--r~pii~gv-----~~~~~~~ 84 (292)
T Consensus 82 ~~~~v~~tv~~~~~aG~agi~IED~~~~k~~~~~~~~~l~~~~e~~~ki~aa~~a~~~~~d~~I~ARTDa~~~~~~~~~e 161 (243)
T cd00377 82 NALNVARTVRELEEAGAAGIHIEDQVGPKKCGHHGGKVLVPIEEFVAKIKAARDARDDLPDFVIIARTDALLAGEEGLDE 161 (243)
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHCCCCHHH
T ss_conf 67999999999997499679865878876566657632306999999999999988636881687542345405788999
Q ss_pred HHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECHHHCCCCCCHHHHHHH
Q ss_conf 9997534321024432001234334317889999999875302330121001111121110689997
Q gi|254780276|r 85 SVELAQYAHSIGADALLVVIPYYNKPNRRGLLAHFGEIATTVSSPIYIYNNPSRTVIEMDVDTMAEL 151 (292)
Q Consensus 85 ~i~~a~~a~~~Gad~i~v~~P~~~~~~~~~i~~~~~~i~~~~~~pi~iYn~P~~~g~~~~~~~l~~L 151 (292)
T Consensus 162 ai~R~~aY~~AGAD~ifi~~~----~~~~ei----~~~~~~~~~Pl~~~~~~~--~~~~~~~eL~~l 218 (243)
T cd00377 162 AIERAKAYAEAGADGIFVEGL----KDPEEI----RAFAEAPDVPLNVNMTPG--GNLLTVAELAEL 218 (243)
T ss_pred HHHHHHHHHHCCCCEEEECCC----CCHHHH----HHHHHHCCCCEEEEECCC--CCCCCHHHHHHC
T ss_conf 999999999829989994589----999999----999973699989995788--999999999986