HHsearch alignment for GI: 254780276 and conserved domain: cd00945
>cd00945 Aldolase_Class_I Class I aldolases. The class I aldolases use an active-site lysine which stablilzes a reaction intermediates via Schiff base formation, and have TIM beta/alpha barrel fold. The members of this family include 2-keto-3-deoxy-6-phosphogluconate (KDPG) and 2-keto-4-hydroxyglutarate (KHG) aldolases, transaldolase, dihydrodipicolinate synthase sub-family, Type I 3-dehydroquinate dehydratase, DeoC and DhnA proteins, and metal-independent fructose-1,6-bisphosphate aldolase. Although structurally similar, the class II aldolases use a different mechanism and are believed to have an independent evolutionary origin.
Probab=98.53 E-value=3.3e-06 Score=65.81 Aligned_cols=169 Identities=20% Similarity=0.196 Sum_probs=120.3
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCHHCCCHHHHHHHHHHHHHCCCC-CCCCCCCCCCC----HHHHHHHHHHHHH
Q ss_conf 689999999999997699899986723250108999999986543110123-44300367410----2789999753432
Q gi|254780276|r 19 IDEDAFVEHIEWQITEGSGGLVPAGTTGESSTLSHEEHCRIIELCVKTVAS-RVPVMAGIGSN----NTRESVELAQYAH 93 (292)
Q Consensus 19 iD~~~~~~~i~~l~~~gv~gi~~~G~tGE~~~Ls~~Er~~~~~~~~~~~~~-r~pii~gv~~~----~~~~~i~~a~~a~ 93 (292)
T Consensus 10 ~t~~~i~~~~~~a~~~~~~av~v~p--------------~~v~~~~~~l~~~~~~v~~vv~fp~g~~~~~~k~~e~~~ai 75 (201)
T cd00945 10 ATLEDIAKLCDEAIEYGFAAVCVNP--------------GYVRLAADALAGSDVPVIVVVGFPTGLTTTEVKVAEVEEAI 75 (201)
T ss_pred CCHHHHHHHHHHHHHHCCCEEEECH--------------HHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHH
T ss_conf 9999999999999862982999889--------------99999999808999838999588999997779999999999
Q ss_pred HCCCCCCCEECCCCCCCC--HHHHHHHHHHHHHHH--CCCCEEEECHHHCCCCCCHHHHHHHH---HHCCHHHHHHCCCC
Q ss_conf 102443200123433431--788999999987530--23301210011111211106899974---32030233100122
Q gi|254780276|r 94 SIGADALLVVIPYYNKPN--RRGLLAHFGEIATTV--SSPIYIYNNPSRTVIEMDVDTMAELA---ATYPNIVGVKDATG 166 (292)
Q Consensus 94 ~~Gad~i~v~~P~~~~~~--~~~i~~~~~~i~~~~--~~pi~iYn~P~~~g~~~~~~~l~~L~---~~~pni~giK~~~~ 166 (292)
T Consensus 76 ~~GAdeid~v~~~~~~~~~~~~~~~~ei~~v~~~~~~g~~~kvi~e~~~l---~~~~~i~~a~~~~~~-~GadfvKtstG 151 (201)
T cd00945 76 DLGADEIDVVINIGSLKEGDWEEVLEEIAAVVEAADGGLPLKVILETRGL---KTADEIAKAARIAAE-AGADFIKTSTG 151 (201)
T ss_pred HHCCCEEEEECCHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCC---CCHHHHHHHHHHHHH-HCCCEEEECCC
T ss_conf 90999899740567775668899999999999973579837999616778---999999999999998-09987985588
Q ss_pred ------CHHHHHHHHHHCCCCEEEC--CCCC--CCHHHHHHHCCCCCCC
Q ss_conf ------1135899997359840320--1322--1001243203344552
Q gi|254780276|r 167 ------KIELVSEQRLSCGFDFIQL--SGED--SSALGFNAHGGVGCIS 205 (292)
Q Consensus 167 ------~~~~~~~~~~~~~~~~~v~--~G~~--~~~~~~~~~G~~G~is 205 (292)
T Consensus 152 ~~~~~at~~~v~~m~~~~~~~~~vk~sGGi~~~~~a~~~l~aGa~~igt 200 (201)
T cd00945 152 FGGGGATVEDVKLMKEAVGGRVGVKAAGGIKTLEDALAAIEAGADGIGT 200 (201)
T ss_pred CCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHCCCEEEC
T ss_conf 7889899999999999828786386358979999999999828653537