HHsearch alignment for GI: 254780276 and conserved domain: cd00947
>cd00947 TBP_aldolase_IIB Tagatose-1,6-bisphosphate (TBP) aldolase and related Type B Class II aldolases. TBP aldolase is a tetrameric class II aldolase that catalyzes the reversible condensation of dihydroxyacetone phosphate with glyceraldehyde 3-phsophate to produce tagatose 1,6-bisphosphate. There is an absolute requirement for a divalent metal ion, usually zinc, and in addition the enzymes are activated by monovalent cations such as Na+. The type A and type B Class II FBPA's differ in the presence and absence of distinct indels in the sequence that result in differing loop lengths in the structures.
Probab=92.83 E-value=0.58 Score=27.60 Aligned_cols=160 Identities=12% Similarity=0.072 Sum_probs=92.6
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 68999999999999769989998672325010899999998654311012344300367410278999975343210244
Q gi|254780276|r 19 IDEDAFVEHIEWQITEGSGGLVPAGTTGESSTLSHEEHCRIIELCVKTVASRVPVMAGIGSNNTRESVELAQYAHSIGAD 98 (292)
Q Consensus 19 iD~~~~~~~i~~l~~~gv~gi~~~G~tGE~~~Ls~~Er~~~~~~~~~~~~~r~pii~gv~~~~~~~~i~~a~~a~~~Gad 98 (292)
T Consensus 21 ~~~e~~~avi~AAee~~sPvIlq-~s~~~~~~~g~~~~~~~~~~~a~~~--~VPV~lHLDH~~~---~e~i~~ai~~Gf~ 94 (276)
T cd00947 21 NNLETLKAILEAAEETRSPVILQ-ISEGAIKYAGLELLVAMVKAAAERA--SVPVALHLDHGSS---FELIKRAIRAGFS 94 (276)
T ss_pred CCHHHHHHHHHHHHHHCCCEEEE-CCHHHHHHCCHHHHHHHHHHHHHHC--CCCEEEECCCCCC---HHHHHHHHHCCCC
T ss_conf 98999999999999968999999-7861776589999999999999977--9999996687678---9999999983998
Q ss_pred CCCEECCCCCCCCHHHHHHHHHHHHHHH---CCC------CEEEEC--H-HHCCCCCCHHHHHHHHHH---------CCH
Q ss_conf 3200123433431788999999987530---233------012100--1-111121110689997432---------030
Q gi|254780276|r 99 ALLVVIPYYNKPNRRGLLAHFGEIATTV---SSP------IYIYNN--P-SRTVIEMDVDTMAELAAT---------YPN 157 (292)
Q Consensus 99 ~i~v~~P~~~~~~~~~i~~~~~~i~~~~---~~p------i~iYn~--P-~~~g~~~~~~~l~~L~~~---------~pn 157 (292)
T Consensus 95 SVM~DgS---~lp~eeNi~~T~~vv~~ah~~gv~VEaElG~vgg~ed~~~~~~~~~T~peea~~Fv~~TgvD~LAvaiGn 171 (276)
T cd00947 95 SVMIDGS---HLPFEENVAKTKEVVELAHAYGVSVEAELGRIGGEEDGVVGDEGLLTDPEEAEEFVEETGVDALAVAIGT 171 (276)
T ss_pred EEEEECC---CCCHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCC
T ss_conf 7985289---8999999999999999999819848998640467567766653334899999999998598878764164
Q ss_pred HHHH-HC--CCCCHHHHHHHHHHCCCCEEECCC
Q ss_conf 2331-00--122113589999735984032013
Q gi|254780276|r 158 IVGV-KD--ATGKIELVSEQRLSCGFDFIQLSG 187 (292)
Q Consensus 158 i~gi-K~--~~~~~~~~~~~~~~~~~~~~v~~G 187 (292)
T Consensus 172 ~HG~yk~~~p~L~~~~L~~I~~~~~vPLVlHGg 204 (276)
T cd00947 172 SHGAYKGGEPKLDFDRLKEIAERVNVPLVLHGG 204 (276)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECC
T ss_conf 344568999864889999999973998797579