HHsearch alignment for GI: 254780276 and conserved domain: cd03307

>cd03307 Mta_CmuA_like MtaA_CmuA_like family. MtaA/CmuA, also MtsA, or methyltransferase 2 (MT2) MT2-A and MT2-M isozymes, are methylcobamide:Coenzyme M methyltransferases, which play a role in metabolic pathways of methane formation from various substrates, such as methylated amines and methanol. Coenzyme M, 2-mercaptoethylsulfonate or CoM, is methylated during methanogenesis in a reaction catalyzed by three proteins. A methyltransferase methylates the corrinoid cofactor, which is bound to a second polypeptide, a corrinoid protein. The methylated corrinoid protein then serves as a substrate for MT2-A and related enzymes, which methylate CoM.
Probab=93.73  E-value=0.71  Score=27.00  Aligned_cols=25  Identities=20%  Similarity=0.425  Sum_probs=15.4

Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCCHH
Q ss_conf             9865431101234430036741027
Q gi|254780276|r   58 RIIELCVKTVASRVPVMAGIGSNNT   82 (292)
Q Consensus        58 ~~~~~~~~~~~~r~pii~gv~~~~~   82 (292)
T Consensus       116 eai~~lr~~l~~~vpliGf~g~P~T  140 (326)
T cd03307         116 EAIKILKEKYGEEVPVIGGMTGPAS  140 (326)
T ss_pred             HHHHHHHHHCCCCCCEEEEECCHHH
T ss_conf             9999999971899766987076899