HHsearch alignment for GI: 254780276 and conserved domain: cd03307
>cd03307 Mta_CmuA_like MtaA_CmuA_like family. MtaA/CmuA, also MtsA, or methyltransferase 2 (MT2) MT2-A and MT2-M isozymes, are methylcobamide:Coenzyme M methyltransferases, which play a role in metabolic pathways of methane formation from various substrates, such as methylated amines and methanol. Coenzyme M, 2-mercaptoethylsulfonate or CoM, is methylated during methanogenesis in a reaction catalyzed by three proteins. A methyltransferase methylates the corrinoid cofactor, which is bound to a second polypeptide, a corrinoid protein. The methylated corrinoid protein then serves as a substrate for MT2-A and related enzymes, which methylate CoM.
Probab=93.73 E-value=0.71 Score=27.00 Aligned_cols=25 Identities=20% Similarity=0.425 Sum_probs=15.4
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCHH
Q ss_conf 9865431101234430036741027
Q gi|254780276|r 58 RIIELCVKTVASRVPVMAGIGSNNT 82 (292)
Q Consensus 58 ~~~~~~~~~~~~r~pii~gv~~~~~ 82 (292)
T Consensus 116 eai~~lr~~l~~~vpliGf~g~P~T 140 (326)
T cd03307 116 EAIKILKEKYGEEVPVIGGMTGPAS 140 (326)
T ss_pred HHHHHHHHHCCCCCCEEEEECCHHH
T ss_conf 9999999971899766987076899