HHsearch alignment for GI: 254780276 and conserved domain: cd04728
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=93.10 E-value=0.56 Score=27.71 Aligned_cols=172 Identities=14% Similarity=-0.024 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCHHCCCHHHHHHHHHHHHHCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHCC-CCC
Q ss_conf 99999999999769989998672325010899999998654311012344300367-4102789999753432102-443
Q gi|254780276|r 22 DAFVEHIEWQITEGSGGLVPAGTTGESSTLSHEEHCRIIELCVKTVASRVPVMAGI-GSNNTRESVELAQYAHSIG-ADA 99 (292)
Q Consensus 22 ~~~~~~i~~l~~~gv~gi~~~G~tGE~~~Ls~~Er~~~~~~~~~~~~~r~pii~gv-~~~~~~~~i~~a~~a~~~G-ad~ 99 (292)
T Consensus 20 ~s~~~~~~ai~aSgaeivTVAlR---R~~~~~~~~~~~l~~i~~---~~~~~LPNTAGc~ta~EAvr~A~laRE~~~t~~ 93 (248)
T cd04728 20 PSPAIMKEAIEASGAEIVTVALR---RVNIGDPGGESFLDLLDK---SGYTLLPNTAGCRTAEEAVRTARLAREALGTDW 93 (248)
T ss_pred CCHHHHHHHHHHHCCCEEEEEEE---ECCCCCCCCHHHHHHHHH---CCCEECCCCCCCCCHHHHHHHHHHHHHHHCCCE
T ss_conf 99999999999968976999986---305788885268987523---386687654011679999999999999848986
Q ss_pred CCE---ECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECHHHCCCCCCHHHHHHHHHHCCHHHHHHCCC--------CCH
Q ss_conf 200---123433431788999999987530233012100111112111068999743203023310012--------211
Q gi|254780276|r 100 LLV---VIPYYNKPNRRGLLAHFGEIATTVSSPIYIYNNPSRTVIEMDVDTMAELAATYPNIVGVKDAT--------GKI 168 (292)
Q Consensus 100 i~v---~~P~~~~~~~~~i~~~~~~i~~~~~~pi~iYn~P~~~g~~~~~~~l~~L~~~~pni~giK~~~--------~~~ 168 (292)
T Consensus 94 IKLEVi~D~~~LlPD~~eTl~Aae~Lv~~G-F~VlpY~~~-------D~v~akrLe-~~Gc~avMPlgsPIGSg~Gl~n~ 164 (248)
T cd04728 94 IKLEVIGDDKTLLPDPIETLKAAEILVKEG-FTVLPYCTD-------DPVLAKRLE-DAGCAAVMPLGSPIGSGQGLLNP 164 (248)
T ss_pred EEEEEECCCCCCCCCHHHHHHHHHHHHHCC-CEEEEECCC-------CHHHHHHHH-HCCCEEEEECCCCCCCCCCCCCH
T ss_conf 999981797677988689999999999889-989786788-------999999999-74953452045643479887999
Q ss_pred HHHHHHHHHCCCCEEECCCC--CCCHHHHHHHCCCCCCCCCC
Q ss_conf 35899997359840320132--21001243203344552222
Q gi|254780276|r 169 ELVSEQRLSCGFDFIQLSGE--DSSALGFNAHGGVGCISVTA 208 (292)
Q Consensus 169 ~~~~~~~~~~~~~~~v~~G~--~~~~~~~~~~G~~G~is~~~ 208 (292)
T Consensus 165 ~~l~~i~e~~~vPvIVDAGiG~pS~Aa~aMElG~daVL~NTA 206 (248)
T cd04728 165 YNLRIIIERADVPVIVDAGIGTPSDAAQAMELGADAVLLNTA 206 (248)
T ss_pred HHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCEEEHHHH
T ss_conf 999999984799889847999756789998726553345468