HHsearch alignment for GI: 254780276 and conserved domain: cd04734
>cd04734 OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 3. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase. One member of this subgroup, the Sinorhizobium meliloti stachydrine utilization protein stcD, has been idenified as a putative N-methylproline demethylase.
Probab=93.77 E-value=0.7 Score=27.05 Aligned_cols=100 Identities=16% Similarity=0.173 Sum_probs=52.4
Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCC--------CCCHHCCCHHHHHHHHHHHHHCCCC-CCCCCC
Q ss_conf 1112017738988868999999999999769989998672--------3250108999999986543110123-443003
Q gi|254780276|r 5 SIPALITPFTKGNLIDEDAFVEHIEWQITEGSGGLVPAGT--------TGESSTLSHEEHCRIIELCVKTVAS-RVPVMA 75 (292)
Q Consensus 5 i~~~~~TPf~~d~~iD~~~~~~~i~~l~~~gv~gi~~~G~--------tGE~~~Ls~~Er~~~~~~~~~~~~~-r~pii~ 75 (292)
T Consensus 17 v~~pm~~~~~~~G~~~~~~~~~y~~-rA~gG~GlIi~~~~~v~~~~~~~~~~~~i~~d~~i~~~k~l~~~vH~~G~~i~~ 95 (343)
T cd04734 17 VSTAHATNYAEDGLPSERYIAYHEE-RARGGAGLIITEGSSVHPSDSPAFGNLNASDDEIIPGFRRLAEAVHAHGAVIMI 95 (343)
T ss_pred EECCCCCCCCCCCCCCHHHHHHHHH-HHCCCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 5454678868899899999999999-967898379970067646556899987668999999999999999735881898
Q ss_pred CCC-------------------------------CCHHHHH-------HHHHHHHHHCCCCCCCEECC
Q ss_conf 674-------------------------------1027899-------99753432102443200123
Q gi|254780276|r 76 GIG-------------------------------SNNTRES-------VELAQYAHSIGADALLVVIP 105 (292)
Q Consensus 76 gv~-------------------------------~~~~~~~-------i~~a~~a~~~Gad~i~v~~P 105 (292)
T Consensus 96 QL~H~Gr~~~~~~~~~~~~~pS~~~~~~~~~~p~~mt~eeI~~ii~~f~~AA~~A~~AGfDgVEIH~a 163 (343)
T cd04734 96 QLTHLGRRGDGDGSWLPPLAPSAVPEPRHRAVPKAMEEEDIEEIIAAFADAARRCQAGGLDGVELQAA 163 (343)
T ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC
T ss_conf 71157766676679986268888866567987944899999999999999999999739988984457