HHsearch alignment for GI: 254780276 and conserved domain: cd04735
>cd04735 OYE_like_4_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 4. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.
Probab=90.99 E-value=1.5 Score=24.61 Aligned_cols=60 Identities=15% Similarity=0.193 Sum_probs=31.1
Q ss_pred EECCCCCCC-CCCCCCCHHHHHHHHHHHHHCCCCEEEECCCC-----CC----HHCCCHHHHHHHHHHHHHCC
Q ss_conf 111201773-89888689999999999997699899986723-----25----01089999999865431101
Q gi|254780276|r 5 SIPALITPF-TKGNLIDEDAFVEHIEWQITEGSGGLVPAGTT-----GE----SSTLSHEEHCRIIELCVKTV 67 (292)
Q Consensus 5 i~~~~~TPf-~~d~~iD~~~~~~~i~~l~~~gv~gi~~~G~t-----GE----~~~Ls~~Er~~~~~~~~~~~ 67 (292)
T Consensus 18 v~apm~~~~a~~dG~~t~~~~~yy~~r-A-gG~-GliIte~~~V~~~g~~~~~~~~i~~d~~i~~~k~l~~av 87 (353)
T cd04735 18 VMAPMTTYSSNPDGTITDDELAYYQRR-A-GGV-GMVITGATYVSPSGIGFEGGFSADDDSDIPGLRKLAQAI 87 (353)
T ss_pred EEHHHCCCCCCCCCCCCHHHHHHHHHH-H-CCC-EEEEECCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 660003866467999999999999998-3-961-499989488861325789987647999999999999999