HHsearch alignment for GI: 254780276 and conserved domain: pfam01180

Probab=90.82  E-value=1.6  Score=24.50  Aligned_cols=85  Identities=13%  Similarity=0.106  Sum_probs=49.2

Q ss_pred             CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCE--ECCCCCC----CCHHHH-HHHHHHHH
Q ss_conf             8999999986543110123443003674102789999753432102443200--1234334----317889-99999987
Q gi|254780276|r   51 LSHEEHCRIIELCVKTVASRVPVMAGIGSNNTRESVELAQYAHSIGADALLV--VIPYYNK----PNRRGL-LAHFGEIA  123 (292)
Q Consensus        51 Ls~~Er~~~~~~~~~~~~~r~pii~gv~~~~~~~~i~~a~~a~~~Gad~i~v--~~P~~~~----~~~~~i-~~~~~~i~  123 (292)
T Consensus        74 ~g~~~~~~~~~~~~~~~~~~~~vi~si~g~~~~d~~~~~~~~~~~-ad~iElNiScPn~~~~~~~~~~~~~~~~i~~~v~  152 (290)
T pfam01180        74 PGLDAVLEELLKRRKEYPRPLGIILSKAGSTVEDYVEVARKIGPF-ADYLELNVSCPNTPGLRALQTDPELAAILLKVVK  152 (290)
T ss_pred             CHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHH-CCEEEEEEECCCCCCCHHHCCCHHHHHHHHHHHH
T ss_conf             307999999998777538885378624669999999999999743-5889999853688761334042989999999987


Q ss_pred             HHHCCCCEEEECH
Q ss_conf             5302330121001
Q gi|254780276|r  124 TTVSSPIYIYNNP  136 (292)
Q Consensus       124 ~~~~~pi~iYn~P  136 (292)
T Consensus       153 ~~~~~Pv~vKlsp  165 (290)
T pfam01180       153 EVSKVPVLVKLAP  165 (290)
T ss_pred             HCCCCCEEEEECC
T ss_conf             5047873898389