HHsearch alignment for GI: 254780276 and conserved domain: pfam01208
>pfam01208 URO-D Uroporphyrinogen decarboxylase (URO-D).
Probab=94.14 E-value=0.48 Score=28.23 Aligned_cols=88 Identities=15% Similarity=0.162 Sum_probs=43.8
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCE---ECCCCCC----CCHHHHHHHHHHHHHH-HC
Q ss_conf 99986543110123443003674102789999753432102443200---1234334----3178899999998753-02
Q gi|254780276|r 56 HCRIIELCVKTVASRVPVMAGIGSNNTRESVELAQYAHSIGADALLV---VIPYYNK----PNRRGLLAHFGEIATT-VS 127 (292)
Q Consensus 56 r~~~~~~~~~~~~~r~pii~gv~~~~~~~~i~~a~~a~~~Gad~i~v---~~P~~~~----~~~~~i~~~~~~i~~~-~~ 127 (292)
T Consensus 121 v~eai~~l~~~l~~~~plig~~~gP~Tl-a~~l~~-----G~~~~~~~l~~~pe~~~~ll~~~t~~~~~~~~~qi~aGad 194 (337)
T pfam01208 121 VLEAIRLLRKELGDEVPLIGFVGGPFTL-ASYLVE-----GFEKFKKLMYKDPELVHALLDKLTDAVIEYLKAQIEAGAD 194 (337)
T ss_pred HHHHHHHHHHHCCCCCCEEEECCCHHHH-HHHHHC-----CHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 9999999999759997479864778999-999977-----9899999999799999999999999999999999982996
Q ss_pred CCCEEEECHHHCCCCCCHHHHHHHHH
Q ss_conf 33012100111112111068999743
Q gi|254780276|r 128 SPIYIYNNPSRTVIEMDVDTMAELAA 153 (292)
Q Consensus 128 ~pi~iYn~P~~~g~~~~~~~l~~L~~ 153 (292)
T Consensus 195 ~-i~i~D-s--~~~~ls~~~~~ef~~ 216 (337)
T pfam01208 195 A-IQIFD-S--WAGLLSPEDFREFVL 216 (337)
T ss_pred E-EEEEC-C--CCCCCCHHHHHHHHH
T ss_conf 7-99834-7--888789899999989