HHsearch alignment for GI: 254780276 and conserved domain: pfam01884

>pfam01884 PcrB PcrB family. This family contains proteins that are related to PcrB. The function of these proteins is unknown.
Probab=90.99  E-value=1.5  Score=24.61  Aligned_cols=176  Identities=18%  Similarity=0.203  Sum_probs=86.6

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             77389888689999999999997699899986723250108999999986543110123443003674102789999753
Q gi|254780276|r   11 TPFTKGNLIDEDAFVEHIEWQITEGSGGLVPAGTTGESSTLSHEEHCRIIELCVKTVASRVPVMAGIGSNNTRESVELAQ   90 (292)
Q Consensus        11 TPf~~d~~iD~~~~~~~i~~l~~~gv~gi~~~G~tGE~~~Ls~~Er~~~~~~~~~~~~~r~pii~gv~~~~~~~~i~~a~   90 (292)
T Consensus        12 ~liDPdk~~~~~~----~~~~~~sgtDaI~VGGS~~~---~~~d~~v~~ik~~-----~~lPviLfPg~~~~--------   71 (231)
T pfam01884        12 TLLDPDETNPEEI----IEIVAESGTDAIMIGGSTGG---VTLDNVVRLIKKV-----YGLPIILFPGNPSG--------   71 (231)
T ss_pred             EEECCCCCCCHHH----HHHHHHCCCCEEEECCCCCC---CCHHHHHHHHHHH-----CCCCEEEECCCHHH--------
T ss_conf             8878999996999----99999749999998898888---5689999999985-----39998995698676--------


Q ss_pred             HHHHCCCCCCCEE------CCCCCCCCHHHHHHHHHHHHHH-HCCCCEEEECHHHC-C----C---CCCHHHHHHHHHHC
Q ss_conf             4321024432001------2343343178899999998753-02330121001111-1----2---11106899974320
Q gi|254780276|r   91 YAHSIGADALLVV------IPYYNKPNRRGLLAHFGEIATT-VSSPIYIYNNPSRT-V----I---EMDVDTMAELAATY  155 (292)
Q Consensus        91 ~a~~~Gad~i~v~------~P~~~~~~~~~i~~~~~~i~~~-~~~pi~iYn~P~~~-g----~---~~~~~~l~~L~~~~  155 (292)
T Consensus        72 --vs~~aDailf~sllNs~np~~lig~qv~aa~~~~~~~~e~ip~gYivi~-~g~~v~~vs~a~~i~~~~~~iaa~~alA  148 (231)
T pfam01884        72 --VSRYADAIFFMSLLNSANPDWIVGAHALGAQTVKKIGEEIIPMGYIVVE-PDSKVGWVGEARPIPRNKPDIAAYYALA  148 (231)
T ss_pred             --CCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEC-CCCCEEEEECCEECCCCCHHHHHHHHHH
T ss_conf             --5867784665641048990567627998899876505005303678875-9971366436623799959999999999


Q ss_pred             CHHHHHH----CC-CCCH----HHHHHHHHHCCCCEEECCC-CC--CCHHHHHHHCCCCCCCCCCCCC
Q ss_conf             3023310----01-2211----3589999735984032013-22--1001243203344552222321
Q gi|254780276|r  156 PNIVGVK----DA-TGKI----ELVSEQRLSCGFDFIQLSG-ED--SSALGFNAHGGVGCISVTANVV  211 (292)
Q Consensus       156 pni~giK----~~-~~~~----~~~~~~~~~~~~~~~v~~G-~~--~~~~~~~~~G~~G~is~~~n~~  211 (292)
T Consensus       149 ~~~~g~~~iYLEaGSGa~~~vp~~vi~~~~~~~~~~LivGGGIrs~e~A~~~~~aGAD~IVv--Gn~i  214 (231)
T pfam01884       149 AKLLGMRIFYLEAGSGAPGPVPEEVIAVKKVLDDARLIVGGGIKSGEKAKEMARAGADVIVT--GNVI  214 (231)
T ss_pred             HHHCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCEEEE--CCCE
T ss_conf             99709818999758999999899999999646897689969979999999999779999997--9714