HHsearch alignment for GI: 254780276 and conserved domain: pfam01884
>pfam01884 PcrB PcrB family. This family contains proteins that are related to PcrB. The function of these proteins is unknown.
Probab=90.99 E-value=1.5 Score=24.61 Aligned_cols=176 Identities=18% Similarity=0.203 Sum_probs=86.6
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 77389888689999999999997699899986723250108999999986543110123443003674102789999753
Q gi|254780276|r 11 TPFTKGNLIDEDAFVEHIEWQITEGSGGLVPAGTTGESSTLSHEEHCRIIELCVKTVASRVPVMAGIGSNNTRESVELAQ 90 (292)
Q Consensus 11 TPf~~d~~iD~~~~~~~i~~l~~~gv~gi~~~G~tGE~~~Ls~~Er~~~~~~~~~~~~~r~pii~gv~~~~~~~~i~~a~ 90 (292)
T Consensus 12 ~liDPdk~~~~~~----~~~~~~sgtDaI~VGGS~~~---~~~d~~v~~ik~~-----~~lPviLfPg~~~~-------- 71 (231)
T pfam01884 12 TLLDPDETNPEEI----IEIVAESGTDAIMIGGSTGG---VTLDNVVRLIKKV-----YGLPIILFPGNPSG-------- 71 (231)
T ss_pred EEECCCCCCCHHH----HHHHHHCCCCEEEECCCCCC---CCHHHHHHHHHHH-----CCCCEEEECCCHHH--------
T ss_conf 8878999996999----99999749999998898888---5689999999985-----39998995698676--------
Q ss_pred HHHHCCCCCCCEE------CCCCCCCCHHHHHHHHHHHHHH-HCCCCEEEECHHHC-C----C---CCCHHHHHHHHHHC
Q ss_conf 4321024432001------2343343178899999998753-02330121001111-1----2---11106899974320
Q gi|254780276|r 91 YAHSIGADALLVV------IPYYNKPNRRGLLAHFGEIATT-VSSPIYIYNNPSRT-V----I---EMDVDTMAELAATY 155 (292)
Q Consensus 91 ~a~~~Gad~i~v~------~P~~~~~~~~~i~~~~~~i~~~-~~~pi~iYn~P~~~-g----~---~~~~~~l~~L~~~~ 155 (292)
T Consensus 72 --vs~~aDailf~sllNs~np~~lig~qv~aa~~~~~~~~e~ip~gYivi~-~g~~v~~vs~a~~i~~~~~~iaa~~alA 148 (231)
T pfam01884 72 --VSRYADAIFFMSLLNSANPDWIVGAHALGAQTVKKIGEEIIPMGYIVVE-PDSKVGWVGEARPIPRNKPDIAAYYALA 148 (231)
T ss_pred --CCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEC-CCCCEEEEECCEECCCCCHHHHHHHHHH
T ss_conf --5867784665641048990567627998899876505005303678875-9971366436623799959999999999
Q ss_pred CHHHHHH----CC-CCCH----HHHHHHHHHCCCCEEECCC-CC--CCHHHHHHHCCCCCCCCCCCCC
Q ss_conf 3023310----01-2211----3589999735984032013-22--1001243203344552222321
Q gi|254780276|r 156 PNIVGVK----DA-TGKI----ELVSEQRLSCGFDFIQLSG-ED--SSALGFNAHGGVGCISVTANVV 211 (292)
Q Consensus 156 pni~giK----~~-~~~~----~~~~~~~~~~~~~~~v~~G-~~--~~~~~~~~~G~~G~is~~~n~~ 211 (292)
T Consensus 149 ~~~~g~~~iYLEaGSGa~~~vp~~vi~~~~~~~~~~LivGGGIrs~e~A~~~~~aGAD~IVv--Gn~i 214 (231)
T pfam01884 149 AKLLGMRIFYLEAGSGAPGPVPEEVIAVKKVLDDARLIVGGGIKSGEKAKEMARAGADVIVT--GNVI 214 (231)
T ss_pred HHHCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCEEEE--CCCE
T ss_conf 99709818999758999999899999999646897689969979999999999779999997--9714