HHsearch alignment for GI: 254780276 and conserved domain: pfam03437
>pfam03437 BtpA BtpA family. The BtpA protein is tightly associated with the thylakoid membranes, where it stabilizes the reaction centre proteins of photosystem I.
Probab=91.12 E-value=1.5 Score=24.69 Aligned_cols=189 Identities=14% Similarity=0.101 Sum_probs=89.8
Q ss_pred CCCCCCCCCC--HHHHHHHHHHHHHCCCCEEEECCCCCCHHCCCH--HHHHHHHHHHHHCCCCCCCCCCCCCC--CHHHH
Q ss_conf 7738988868--999999999999769989998672325010899--99999865431101234430036741--02789
Q gi|254780276|r 11 TPFTKGNLID--EDAFVEHIEWQITEGSGGLVPAGTTGESSTLSH--EEHCRIIELCVKTVASRVPVMAGIGS--NNTRE 84 (292)
Q Consensus 11 TPf~~d~~iD--~~~~~~~i~~l~~~gv~gi~~~G~tGE~~~Ls~--~Er~~~~~~~~~~~~~r~pii~gv~~--~~~~~ 84 (292)
T Consensus 17 sP~~-~~~~~~iie~A~~ea~~l~~~GvDgviv-EN~~D~Py~~~~~~etvaamt~i~~~v~~~~~iP~GvnvL~nd~~a 94 (254)
T pfam03437 17 SPGY-KANLDAVIDKAVSDAMALEEGGFDAVIL-ENYGDAPYLKTVGPETVAAMTVIAGEVKSDVSIPLGINVLRNDAVA 94 (254)
T ss_pred CCCC-CCCHHHHHHHHHHHHHHHHHCCCCEEEE-ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHH
T ss_conf 9888-9999999999999999999779988998-0689977746776698999999999998744887367776178589
Q ss_pred HHHHHHHHHHCCCCCCCEEC--------CCCCCCCHHHHHHHHHHHHHHHCCCCEEEECHHHCCCCCC---HHHHHH-HH
Q ss_conf 99975343210244320012--------3433431788999999987530233012100111112111---068999-74
Q gi|254780276|r 85 SVELAQYAHSIGADALLVVI--------PYYNKPNRRGLLAHFGEIATTVSSPIYIYNNPSRTVIEMD---VDTMAE-LA 152 (292)
Q Consensus 85 ~i~~a~~a~~~Gad~i~v~~--------P~~~~~~~~~i~~~~~~i~~~~~~pi~iYn~P~~~g~~~~---~~~l~~-L~ 152 (292)
T Consensus 95 ala---iA~a~ga~FIRv~~~~g~~~~d~G~~~~~a~~~~r~R~~l~-a-~v~-i~aDV~~Kh~~~l~~~~~~~~~~~~~ 168 (254)
T pfam03437 95 ALA---IAYAVGADFIRVNVLTGVAASDQGILEGNAGELARYRKLLP-S-RIK-ILADVHVKHAVHLGNRDIESAVLDTI 168 (254)
T ss_pred HHH---HHHHHCCCEEEECCEECEEECCCCCCCCCHHHHHHHHHHCC-C-CCE-EEEEECCCCCCCCCCCCHHHHHHHHH
T ss_conf 999---99982997698713765333577531553899999999719-9-958-99755001254579999899999999
Q ss_pred HHC--CHHHHHHCC---CCCHHHHHHHHHHCCCCEEECCCCCC-CHHHHHHHCCCCCCCCCC
Q ss_conf 320--302331001---22113589999735984032013221-001243203344552222
Q gi|254780276|r 153 ATY--PNIVGVKDA---TGKIELVSEQRLSCGFDFIQLSGEDS-SALGFNAHGGVGCISVTA 208 (292)
Q Consensus 153 ~~~--pni~giK~~---~~~~~~~~~~~~~~~~~~~v~~G~~~-~~~~~~~~G~~G~is~~~ 208 (292)
T Consensus 169 ~~~~aDaiivTG~~TG~~~~~~~l~~vk~~~~~PvlvGSGvt~~Ni~~~l~-~ADG~IVGS~ 229 (254)
T pfam03437 169 ERGLADAVILSGKTTGGEVDLEELKLAKETVPVPVLVGSGVNLENLEELWS-IADGFIVGTS 229 (254)
T ss_pred HHCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHH-HCCEEEEEHH
T ss_conf 826898999787302799999999999962699889957989889999998-7899998422