HHsearch alignment for GI: 254780276 and conserved domain: pfam03437

>pfam03437 BtpA BtpA family. The BtpA protein is tightly associated with the thylakoid membranes, where it stabilizes the reaction centre proteins of photosystem I.
Probab=91.12  E-value=1.5  Score=24.69  Aligned_cols=189  Identities=14%  Similarity=0.101  Sum_probs=89.8

Q ss_pred             CCCCCCCCCC--HHHHHHHHHHHHHCCCCEEEECCCCCCHHCCCH--HHHHHHHHHHHHCCCCCCCCCCCCCC--CHHHH
Q ss_conf             7738988868--999999999999769989998672325010899--99999865431101234430036741--02789
Q gi|254780276|r   11 TPFTKGNLID--EDAFVEHIEWQITEGSGGLVPAGTTGESSTLSH--EEHCRIIELCVKTVASRVPVMAGIGS--NNTRE   84 (292)
Q Consensus        11 TPf~~d~~iD--~~~~~~~i~~l~~~gv~gi~~~G~tGE~~~Ls~--~Er~~~~~~~~~~~~~r~pii~gv~~--~~~~~   84 (292)
T Consensus        17 sP~~-~~~~~~iie~A~~ea~~l~~~GvDgviv-EN~~D~Py~~~~~~etvaamt~i~~~v~~~~~iP~GvnvL~nd~~a   94 (254)
T pfam03437        17 SPGY-KANLDAVIDKAVSDAMALEEGGFDAVIL-ENYGDAPYLKTVGPETVAAMTVIAGEVKSDVSIPLGINVLRNDAVA   94 (254)
T ss_pred             CCCC-CCCHHHHHHHHHHHHHHHHHCCCCEEEE-ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHH
T ss_conf             9888-9999999999999999999779988998-0689977746776698999999999998744887367776178589


Q ss_pred             HHHHHHHHHHCCCCCCCEEC--------CCCCCCCHHHHHHHHHHHHHHHCCCCEEEECHHHCCCCCC---HHHHHH-HH
Q ss_conf             99975343210244320012--------3433431788999999987530233012100111112111---068999-74
Q gi|254780276|r   85 SVELAQYAHSIGADALLVVI--------PYYNKPNRRGLLAHFGEIATTVSSPIYIYNNPSRTVIEMD---VDTMAE-LA  152 (292)
Q Consensus        85 ~i~~a~~a~~~Gad~i~v~~--------P~~~~~~~~~i~~~~~~i~~~~~~pi~iYn~P~~~g~~~~---~~~l~~-L~  152 (292)
T Consensus        95 ala---iA~a~ga~FIRv~~~~g~~~~d~G~~~~~a~~~~r~R~~l~-a-~v~-i~aDV~~Kh~~~l~~~~~~~~~~~~~  168 (254)
T pfam03437        95 ALA---IAYAVGADFIRVNVLTGVAASDQGILEGNAGELARYRKLLP-S-RIK-ILADVHVKHAVHLGNRDIESAVLDTI  168 (254)
T ss_pred             HHH---HHHHHCCCEEEECCEECEEECCCCCCCCCHHHHHHHHHHCC-C-CCE-EEEEECCCCCCCCCCCCHHHHHHHHH
T ss_conf             999---99982997698713765333577531553899999999719-9-958-99755001254579999899999999


Q ss_pred             HHC--CHHHHHHCC---CCCHHHHHHHHHHCCCCEEECCCCCC-CHHHHHHHCCCCCCCCCC
Q ss_conf             320--302331001---22113589999735984032013221-001243203344552222
Q gi|254780276|r  153 ATY--PNIVGVKDA---TGKIELVSEQRLSCGFDFIQLSGEDS-SALGFNAHGGVGCISVTA  208 (292)
Q Consensus       153 ~~~--pni~giK~~---~~~~~~~~~~~~~~~~~~~v~~G~~~-~~~~~~~~G~~G~is~~~  208 (292)
T Consensus       169 ~~~~aDaiivTG~~TG~~~~~~~l~~vk~~~~~PvlvGSGvt~~Ni~~~l~-~ADG~IVGS~  229 (254)
T pfam03437       169 ERGLADAVILSGKTTGGEVDLEELKLAKETVPVPVLVGSGVNLENLEELWS-IADGFIVGTS  229 (254)
T ss_pred             HHCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHH-HCCEEEEEHH
T ss_conf             826898999787302799999999999962699889957989889999998-7899998422