HHsearch alignment for GI: 254780277 and conserved domain: PRK09145

>PRK09145 DNA polymerase III subunit epsilon; Validated.
Probab=98.96  E-value=1.5e-09  Score=88.29  Aligned_cols=157  Identities=14%  Similarity=0.173  Sum_probs=96.9

Q ss_pred             HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEECC----CC------CCCCCCCCCCCCCHHHH
Q ss_conf             999998668523233222433110012442010257766544345502313----74------43334565001788999
Q gi|254780277|r  380 WVQKLETIGSASFKIITDTMDAFHSKPIAIAISTLDQKDDTSFKVETIFID----LS------VHTSQDSTGKNTLTKEI  449 (976)
Q Consensus       380 li~~L~~~~~ia~DtETt~ld~~~~~ivGisls~~~~~~~~~~~~~~~yip----~~------~~~~~d~~~~~~~~~ev  449 (976)
T Consensus        22 l~~~~~~~~fVv~D~ETTGL~~~~D~IieIgav~v~~~~i~~~~~f~~lV~P~~~i~~~~~~IhGIt~~~l~~ap~~~ev  101 (203)
T PRK09145         22 LFEPPPPDEWVALDCETTGLDPRRAEIVSIAAVKIRGNRILTSERLELLVRPPQSLSAESIKIHRLRHQDLEHGLSEEEA  101 (203)
T ss_pred             HHCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEEECCEEECCCEEEEEECCCCCCCHHHHCCCCCCHHHHCCCCCHHHH
T ss_conf             51589999899998568999999970699999999999993175289998979959864520138787998139999999


Q ss_pred             HHHHHHHHCCCCCHHHHCCCCHHHHHHH----H-CCCCCCC-CCCHHHH--HH---HHCCCCCCCCHHHHHHHHCCCCCC
Q ss_conf             9744442022210011003212378898----6-1886664-2100234--55---431687667724667762244422
Q gi|254780277|r  450 LSYLKKFFENEHFLKIGHNIKYDKLVLH----R-YGISMRG-FEDIMLM--SY---VLDSGRSSHDIASIAQKWLSYTRK  518 (976)
Q Consensus       450 l~~L~~lle~~~i~kIgHN~KfD~~~L~----~-~GI~l~~-i~DTmla--ay---LLdp~~~~~~L~~la~~yL~~~~~  518 (976)
T Consensus       102 l~~f~~fi~~~~--lVgHNa~FD~~fL~~~~~r~~g~~l~~~~id~~~l~~~~~~~~~~~~~~~~~L~~l~~~~-gi~~-  177 (203)
T PRK09145        102 LRQLLAFIGNRP--LVGYYLEFDVAMLNRYVRPLLGIGLPNPLIEVSSLYHDKKERHLPDAYIDLRFDAILKHL-DLPV-  177 (203)
T ss_pred             HHHHHHHCCCCE--EEEECHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHC-CCCC-
T ss_conf             999998829998--999878999999999999962999999877609879999996676987788999999857-9878-


Q ss_pred             CCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             3356543222100000012333322211111245677632
Q gi|254780277|r  519 EILKSRKSSIPIDKISDSQVQEHAIENSNVILQLWLLLRP  558 (976)
Q Consensus       519 e~~~~~k~~~~~~~i~~e~~~~Yaa~Da~~t~~L~~~l~~  558 (976)
T Consensus       178 -----------------~-~~HrAL~DA~aTa~lfl~L~k  199 (203)
T PRK09145        178 -----------------L-GRHDALNDAIMTALIYLRLRK  199 (203)
T ss_pred             -----------------C-CCCCHHHHHHHHHHHHHHHHC
T ss_conf             -----------------9-997989999999999999867