HHsearch alignment for GI: 254780277 and conserved domain: smart00484

>smart00484 XPGI Xeroderma pigmentosum G I-region. domain in nucleases
Probab=91.17  E-value=0.77  Score=24.71  Aligned_cols=66  Identities=30%  Similarity=0.376  Sum_probs=49.6

Q ss_pred             HCCCCEEEECCEEHHHHHHHHHHHHHHCCCCEEEECCCCHHHEECCCCEEEEECCCC------CEECHHHHHHHHCC
Q ss_conf             709979956890166589999999984899499986870121223797599966788------35389999888489
Q gi|254780277|r  104 AFGIPAIEIQGFEADDIIATYTYIAEKEGFAVTIISTDKDLMQLVSPTTCLYDTVKE------EKIDIEHVIKKWGI  174 (976)
Q Consensus       104 ~~gi~~~~~~~~EADDviatla~~~~~~~~~v~i~s~DkD~~Qlv~~~v~~~~~~~~------~~~~~~~v~~~~gv  174 (976)
T Consensus         2 l~Gipyi~Ap~-Eaea~ca~L~~~----g~vd~v~s~D~D~l~~G~~~~ir~~~~~~~~~~~~~~~~l~~il~~L~l   73 (73)
T smart00484        2 LMGIPYIVAPY-EAEAQCAYLAKS----GLVDAIITEDSDLLLFGAPRLYRNLFFSGKKKLEFRIIDLESVLKELGL   73 (73)
T ss_pred             CCCCCEEECCC-CHHHHHHHHHHC----CCEEEEECCCHHHHHHCCCEEEEECCCCCCCCCCEEEEEHHHHHHHCCC
T ss_conf             46963697697-899999999988----9889997262664764976402312335884355499889999976489