RPSBLAST alignment for GI: 254780277 and conserved domain: smart00475
>gnl|CDD|128751 smart00475, 53EXOc, 5'-3' exonuclease. Length = 259
Score = 315 bits (809), Expect = 4e-86
Identities = 133/262 (50%), Positives = 178/262 (67%), Gaps = 10/262 (3%)
Query: 5 NHLFLVDGSSFIYRAFYATPLLSRKHDGLPVNAIAGFCNMLWKLLQNSRKESIASHFAVI 64
L LVDGSS +RA++A P L + G P NA+ GF ML KL+ KE ++ AV+
Sbjct: 1 KKLLLVDGSSLAFRAYFALPPL-KNSKGEPTNAVYGFLRMLLKLI----KEEKPTYVAVV 55
Query: 65 FDYPAVTFRNEIYPDYKANRPKIPEMLLPQLPLVRLATQAFGIPAIEIQGFEADDIIATY 124
FD TFR+E+YP+YKANRPK P+ LL Q+PL++ A GIP +E++G+EADD+IAT
Sbjct: 56 FDAKGKTFRHELYPEYKANRPKTPDELLEQIPLIKELLDALGIPVLEVEGYEADDVIATL 115
Query: 125 TYIAEKEGFAVTIISTDKDLMQLVSPTTCLYDTVKEEK----IDIEHVIKKWGIPPEKMV 180
AE EG+ V I+S DKDL+QLVS + D K K E+VI+K+G+ PE+++
Sbjct: 116 AKKAEAEGYEVRIVSGDKDLLQLVSDKVSVLDPTKGIKEFELYTPENVIEKYGLTPEQII 175
Query: 181 CLQALTGDSIDNIPGIPGIGYKTAALLLQEYGNLENILINASRIKQKKRRENILEYAETA 240
+AL GDS DNIPG+PGIG KTAA LL+E+G+LENIL N ++K KK RE +L + E A
Sbjct: 176 DYKALMGDSSDNIPGVPGIGEKTAAKLLKEFGSLENILENLDKLK-KKLREKLLAHKEDA 234
Query: 241 RLSRKLVMLRTDVPITIPLEHL 262
+LSRKL + TDVP+ + LE L
Sbjct: 235 KLSRKLATIETDVPLEVDLEDL 256