HHsearch results for GI: 254780278 and protein with PDBid: 3f3k_A
>3f3k_A Uncharacterized protein YKR043C; structural genomics,, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 1.75A {Saccharomyces cerevisiae} PDB: 3lg2_A 3ll4_A*
Probab=100.00 E-value=0 Score=304.41 Aligned_cols=191 Identities=23% Similarity=0.323 Sum_probs=153.3
Q ss_pred CCCEEEEEECCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC-----CCCCEEEEECCCCCCCCCCHHHHHHCCC
Q ss_conf 98589999567611102684204757555989899999999998751-----8884277423322431000112210013
Q gi|254780278|r 1 MNRRLVLVRHGQSEWNIKNLFTGLRNPPLTSIGMSEANEIGKLLAKQ-----GMVFDAAFSSSLKRAQDTCQIILQEINQ 75 (212)
Q Consensus 1 M~~~i~liRHGet~~n~~~~~~G~~D~~Lt~~G~~QA~~~~~~l~~~-----~~~~~~i~sSpl~Ra~qTa~~i~~~~~~ 75 (212)
|+.||||||||||+||.+++|||++|+|||+.|++||+.+|++|... ...++.||||||+||+|||+++++.++.
T Consensus 4 mt~rl~LiRHGet~~N~~~r~~G~~D~pLTe~G~~QA~~l~~~l~~~~~~l~~~~~~~i~sSPl~Ra~qTA~~i~~~~~~ 83 (265)
T 3f3k_A 4 LTPRCIIVRHGQTEWSKSGQYTGLTDLPLTPYGEGQMLRTGESVFRNNQFLNPDNITYIFTSPRLRARQTVDLVLKPLSD 83 (265)
T ss_dssp CCCEEEEEECCCCHHHHHTCCCSSCCCCCCHHHHHHHHHHHHHHHTC-CCSCGGGEEEEEECSSHHHHHHHHHHTTTSCH
T ss_pred CCCEEEEEECCCCHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCC
T ss_conf 99779998089981664687669899985999999999999999861500158887889979607866555554421253
Q ss_pred ---CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCCC--CCCCCCCCCHHHHHHHHHHCCHHHHHHHC-----
Q ss_conf ---32122222101444343101112356886211012001023--33321123112356553101001210000-----
Q gi|254780278|r 76 ---QHITPIYDDALNERDYGHIAGMNKDDVCNKWGAEQVHLWRR--SYSVAPPGGESLRDTVARVLAYYVQFILP----- 145 (212)
Q Consensus 76 ---~~~~~~~~~~L~E~~~G~~eG~~~~e~~~~~~~~~~~~~~~--~~~~~~p~GES~~~~~~Rv~~~~~~~i~~----- 145 (212)
..+++.++++|+|++||.|||++.+|+.+.+++....++.. .+...+|+|||+.++.+|+..++.++..-
T Consensus 84 ~~~~~~~v~~~~~L~E~~~G~~eG~~~~ei~~~~~~~~~~~~~~~~~~~~~~~~gEs~~~~~~R~~~~l~~i~~~~~~~~ 163 (265)
T 3f3k_A 84 EQRAKIRVVVDDDLREWEYGDYEGMLTREIIELRKSRGLDKERPWNIWRDGCENGETTQQIGLRLSRAIARIQNLHRKHQ 163 (265)
T ss_dssp HHHHTSEEEECGGGSCCCCGGGTTCCHHHHHHHHHHTTCCSSSCCCHHHHCCTTSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCEECHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 22445320223656412478646877899999876445554302334567788998899999999999999999999866
Q ss_pred CCCCCCCEEEECCCHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEEEC
Q ss_conf 023324115646806999999998589977863231799619999988
Q gi|254780278|r 146 LILQNKSILVVAHGNSLRSLIMVLEKITVDDIPKVTIGTGEAFVYQLG 193 (212)
Q Consensus 146 ~~~~~~~vliVsHg~~ir~l~~~l~~~~~~~~~~~~i~~g~~~i~~~~ 193 (212)
....+++|+|||||++||+|+++++|++...... +.|++.+++.++
T Consensus 164 ~~~~~~~IlvVsHg~~ir~l~~~~lgl~~~~~~~--~~~~~~~~~~~~ 209 (265)
T 3f3k_A 164 SEGRASDIMVFAHGHALRYFAAIWFGLGVQKKCE--TIEEIQNVKSYD 209 (265)
T ss_dssp HTTCCCEEEEEECHHHHHHHHHHHTTCSEEEECC--SHHHHCCCCCCC
T ss_pred HHCCCCCEEEEECHHHHHHHHHHHHCCCHHHHHC--CCCCCCCEEEEC
T ss_conf 5079992999975499999999993979788404--213555258851