RPS-BLAST 2.2.22 [Sep-27-2009]
Database: pdb70
24,244 sequences; 5,693,230 total letters
Searching..................................................done
Query= gi|254780278|ref|YP_003064691.1| phosphoglyceromutase
[Candidatus Liberibacter asiaticus str. psy62]
(212 letters)
>1e58_A Phosphoglycerate mutase; phosphohistidine, glycolysis and
gluconeogenesis, isomerase; HET: NEP; 1.25A {Escherichia
coli} SCOP: c.60.1.1 PDB: 1e59_A*
Length = 249
Score = 180 bits (458), Expect = 2e-46
Identities = 81/234 (34%), Positives = 125/234 (53%), Gaps = 25/234 (10%)
Query: 4 RLVLVRHGQSEWNIKNLFTGLRNPPLTSIGMSEANEIGKLLAKQGMVFDAAFSSSLKRAQ 63
+LVLVRHG+S+WN +N FTG + L+ G+SEA GKLL ++G FD A++S LKRA
Sbjct: 4 KLVLVRHGESQWNKENRFTGWYDVDLSEKGVSEAKAAGKLLKEEGYSFDFAYTSVLKRAI 63
Query: 64 DTCQIILQEINQQHITPIYDDALNERDYGHIAGMNKDDVCNKWGAEQVHLWRRSYSVAPP 123
T +L E++Q + LNER YG + G+NK + K+G EQV WRR ++V PP
Sbjct: 64 HTLWNVLDELDQAWLPVEKSWKLNERHYGALQGLNKAETAEKYGDEQVKQWRRGFAVTPP 123
Query: 124 G-------------------------GESLRDTVARVLAYYVQFILPLILQNKSILVVAH 158
ESL T+ RV+ Y+ + ILP + + +++ AH
Sbjct: 124 ELTKDDERYPGHDPRYAKLSEKELPLTESLALTIDRVIPYWNETILPRMKSGERVIIAAH 183
Query: 159 GNSLRSLIMVLEKITVDDIPKVTIGTGEAFVYQLGADASIVSKNIMRGQSPAEK 212
GNSLR+L+ L+ ++ ++I ++ I TG VY+ + + + +
Sbjct: 184 GNSLRALVKYLDNMSEEEILELNIPTGVPLVYEFDENFKPLKRYYLGNADEIAA 237
>3d8h_A Glycolytic phosphoglycerate mutase; structural genomics, malaria,
glycolysis, isomerase, structural genomics consortium,
SGC; 2.01A {Cryptosporidium parvum iowa II}
Length = 267
Score = 178 bits (453), Expect = 6e-46
Identities = 86/237 (36%), Positives = 126/237 (53%), Gaps = 25/237 (10%)
Query: 1 MNRRLVLVRHGQSEWNIKNLFTGLRNPPLTSIGMSEANEIGKLLAKQGMVFDAAFSSSLK 60
+L L+RHG+SEWN +N FTG + L+ G+SEA E G++L ++G FD ++S LK
Sbjct: 19 STYKLTLIRHGESEWNKENRFTGWTDVSLSEQGVSEAIEAGRMLLEKGFKFDVVYTSVLK 78
Query: 61 RAQDTCQIILQEINQQHITPIYDDALNERDYGHIAGMNKDDVCNKWGAEQVHLWRRSYSV 120
RA T +L+E+ + I LNER YG + G+NK + +K+G +QV +WRRS+ V
Sbjct: 79 RAIMTTWTVLKELGNINCPIINHWRLNERHYGALQGLNKSETASKFGEDQVKIWRRSFDV 138
Query: 121 AP-------------------------PGGESLRDTVARVLAYYVQFILPLILQNKSILV 155
P P E L+DTV RV Y+ I P I+ KS+LV
Sbjct: 139 PPPVLEKSDPRWPGNELIYKGICPSCLPTTECLKDTVERVKPYFEDVIAPSIMSGKSVLV 198
Query: 156 VAHGNSLRSLIMVLEKITVDDIPKVTIGTGEAFVYQLGADASIVSKNIMRGQSPAEK 212
AHGNSLR+L+ +LE +T + I +V I T V +L + K + + +
Sbjct: 199 SAHGNSLRALLYLLEGMTPEQILEVNIPTACPLVLELDDYLKVTKKYYLISEEELKA 255
>1fzt_A Phosphoglycerate mutase; open B-sheet-helices, isomerase; NMR
{Schizosaccharomyces pombe} SCOP: c.60.1.1
Length = 211
Score = 170 bits (432), Expect = 1e-43
Identities = 107/201 (53%), Positives = 137/201 (68%)
Query: 3 RRLVLVRHGQSEWNIKNLFTGLRNPPLTSIGMSEANEIGKLLAKQGMVFDAAFSSSLKRA 62
LVL RHG+SEWN NLFTG ++P L+ G+ EA G+ L +G FD AF+S+L+RA
Sbjct: 8 NLLVLTRHGESEWNKLNLFTGWKDPALSETGIKEAKLGGERLKSRGYKFDIAFTSALQRA 67
Query: 63 QDTCQIILQEINQQHITPIYDDALNERDYGHIAGMNKDDVCNKWGAEQVHLWRRSYSVAP 122
Q TCQIIL+E+ + ++ I + LNER YG + G+NKDD KWGAEQV +WRRSY +AP
Sbjct: 68 QKTCQIILEEVGEPNLETIKSEKLNERYYGDLQGLNKDDARKKWGAEQVQIWRRSYDIAP 127
Query: 123 PGGESLRDTVARVLAYYVQFILPLILQNKSILVVAHGNSLRSLIMVLEKITVDDIPKVTI 182
P GESL+DT RVL YY I+P IL+ + +L+ AHGNSLR+LIM LE +T D I K +
Sbjct: 128 PNGESLKDTAERVLPYYKSTIVPHILKGEKVLIAAHGNSLRALIMDLEGLTGDQIVKREL 187
Query: 183 GTGEAFVYQLGADASIVSKNI 203
TG VY L D VSK +
Sbjct: 188 ATGVPIVYHLDKDGKYVSKEL 208
>1qhf_A Protein (phosphoglycerate mutase); transferase (phosphoryl); HET:
3PG; 1.70A {Saccharomyces cerevisiae} SCOP: c.60.1.1
PDB: 5pgm_D 1bq3_D* 1bq4_D 4pgm_A 3pgm_A*
Length = 240
Score = 157 bits (398), Expect = 1e-39
Identities = 79/224 (35%), Positives = 116/224 (51%), Gaps = 25/224 (11%)
Query: 4 RLVLVRHGQSEWNIKNLFTGLRNPPLTSIGMSEANEIGKLLAKQGMVFDAAFSSSLKRAQ 63
+LVLVRHGQSEWN KNLFTG + L++ G EA G+LL ++ + D ++S L RA
Sbjct: 2 KLVLVRHGQSEWNEKNLFTGWVDVKLSAKGQQEAARAGELLKEKKVYPDVLYTSKLSRAI 61
Query: 64 DTCQIILQEINQQHITPIYDDALNERDYGHIAGMNKDDVCNKWGAEQVHLWRRSYSVAP- 122
T I L++ ++ I LNER YG + G +K + K+G E+ + +RRS+ V P
Sbjct: 62 QTANIALEKADRLWIPVNRSWRLNERHYGDLQGKDKAETLKKFGEEKFNTYRRSFDVPPP 121
Query: 123 ------------------------PGGESLRDTVARVLAYYVQFILPLILQNKSILVVAH 158
P ESL + R+L Y+ I +L K++++ AH
Sbjct: 122 PIDASSPFSQKGDERYKYVDPNVLPETESLALVIDRLLPYWQDVIAKDLLSGKTVMIAAH 181
Query: 159 GNSLRSLIMVLEKITVDDIPKVTIGTGEAFVYQLGADASIVSKN 202
GNSLR L+ LE I+ DI K+ I TG V++L + +
Sbjct: 182 GNSLRGLVKHLEGISDADIAKLNIPTGIPLVFELDENLKPSKPS 225
>3gp3_A 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase;
phosphoglyceromutase, decode, SBRI, niaid, UWPPG,
glycolysis, isomerase; HET: PG4 SEP; 1.50A {Burkholderia
pseudomallei} PDB: 3fdz_A* 3ezn_A* 3gp5_A* 3gw8_A*
Length = 257
Score = 157 bits (397), Expect = 2e-39
Identities = 83/223 (37%), Positives = 120/223 (53%), Gaps = 25/223 (11%)
Query: 4 RLVLVRHGQSEWNIKNLFTGLRNPPLTSIGMSEANEIGKLLAKQGMVFDAAFSSSLKRAQ 63
+LVL+RHG+S WN +N FTG + LT G EA + G+LL + G FD A++S LKRA
Sbjct: 11 KLVLIRHGESTWNKENRFTGWVDVDLTEQGNREARQAGQLLKEAGYTFDIAYTSVLKRAI 70
Query: 64 DTCQIILQEINQQHITPIYDDALNERDYGHIAGMNKDDVCNKWGAEQVHLWRRSYSVAP- 122
T + +++ ++ ++ LNER YG ++G+NK + K+G EQV +WRRSY P
Sbjct: 71 RTLWHVQDQMDLMYVPVVHSWRLNERHYGALSGLNKAETAAKYGDEQVLVWRRSYDTPPP 130
Query: 123 ------------------------PGGESLRDTVARVLAYYVQFILPLILQNKSILVVAH 158
P E L+DTVARVL + + I P + K +L+ AH
Sbjct: 131 ALEPGDERAPYADPRYAKVPREQLPLTECLKDTVARVLPLWNESIAPAVKAGKQVLIAAH 190
Query: 159 GNSLRSLIMVLEKITVDDIPKVTIGTGEAFVYQLGADASIVSK 201
GNSLR+LI L+ I+ DI + I G VY+L + +
Sbjct: 191 GNSLRALIKYLDGISDADIVGLNIPNGVPLVYELDESLTPIRH 233
>3kkk_A Phosphoglycerate mutase; PGAM, glycolysis, malaria, structural
genomics, medical structural genomics of pathogenic
protozoa, MSGPP; 2.08A {Plasmodium falciparum 3D7} PDB:
1xq9_A
Length = 258
Score = 156 bits (394), Expect = 4e-39
Identities = 82/226 (36%), Positives = 117/226 (51%), Gaps = 25/226 (11%)
Query: 2 NRRLVLVRHGQSEWNIKNLFTGLRNPPLTSIGMSEANEIGKLLAKQGMVFDAAFSSSLKR 61
LVL+RHG+S WN +N FTG + PL+ G EA GK L ++ FD ++S LKR
Sbjct: 11 TYTLVLLRHGESTWNKENKFTGWTDVPLSEKGEEEAIAAGKYLKEKNFKFDVVYTSVLKR 70
Query: 62 AQDTCQIILQEINQQHITPIYDDALNERDYGHIAGMNKDDVCNKWGAEQVHLWRRSYSVA 121
A T +L+ + H+ + LNER G + G+NK + K+G EQV +WRRSY +
Sbjct: 71 AICTAWNVLKTADLLHVPVVKTWRLNERHCGSLQGLNKSETAKKYGEEQVKIWRRSYDIP 130
Query: 122 P-------------------------PGGESLRDTVARVLAYYVQFILPLILQNKSILVV 156
P P E L+DTV RVL ++ I P IL NK ++V
Sbjct: 131 PPKLDKEDNRWPGHNVVYKNVPKDALPFTECLKDTVERVLPFWFDHIAPDILANKKVMVA 190
Query: 157 AHGNSLRSLIMVLEKITVDDIPKVTIGTGEAFVYQLGADASIVSKN 202
AHGNSLR L+ L+ ++ D+ ++ I TG VY+L + +
Sbjct: 191 AHGNSLRGLVKHLDNLSEADVLELNIPTGVPLVYELDENLKPIKHY 236
>1bif_A 6-phosphofructo-2-kinase/ fructose-2,6- bisphosphatase; transferase
(phospho), hydrolase (phospho), glycolysis, bifunctional
enzyme; HET: ATG; 2.00A {Rattus norvegicus} SCOP:
c.37.1.7 c.60.1.4 PDB: 3bif_A* 2bif_A* 1k6m_A* 1c80_A*
1c7z_A* 1c81_A* 1tip_A* 1fbt_A
Length = 469
Score = 153 bits (388), Expect = 2e-38
Identities = 41/188 (21%), Positives = 77/188 (40%), Gaps = 14/188 (7%)
Query: 3 RRLVLVRHGQSEWNIKNLFTGLRNPPLTSIGMSEANEIGKLLAKQGMVFDAAFSSSLKRA 62
R + L RHG+SE N+K G +P L+ G + + + ++ Q + F+S +KR
Sbjct: 250 RSIYLCRHGESELNLKGRIGG--DPGLSPRGREFSKHLAQFISDQNIKDLKVFTSQMKRT 307
Query: 63 QDTCQIILQEINQQHITPIYDDALNERDYGHIAGMNKDDVCNKWGAEQVHLWRRSYSVAP 122
T + + Q LNE D G M +++ + + E + Y
Sbjct: 308 IQTAEALSVPYEQ-------FKVLNEIDAGVCEEMTYEEIQDHYPLEFALRDQDKYRYRY 360
Query: 123 PGGESLRDTVARVLAYYVQFILPLILQNKSILVVAHGNSLRSLIMVLEKITVDDIPKVTI 182
P GES D V R+ ++ + + +++LV+ H +R L+ +++P +
Sbjct: 361 PKGESYEDLVQRLEP-----VIMELERQENVLVICHQAVMRCLLAYFLDKAAEELPYLKC 415
Query: 183 GTGEAFVY 190
Sbjct: 416 PLHTVLKL 423
>2hhj_A Bisphosphoglycerate mutase; isomerase; HET: NEP DG2 3PG; 1.50A
{Homo sapiens} SCOP: c.60.1.1 PDB: 1t8p_A* 2f90_A*
2a9j_A* 2h4z_A* 2h52_A* 2h4x_A*
Length = 267
Score = 152 bits (384), Expect = 5e-38
Identities = 79/230 (34%), Positives = 118/230 (51%), Gaps = 29/230 (12%)
Query: 2 NRRLVLVRHGQSEWNIKNLFTGLRNPPLTSIGMSEANEIGKLLAKQGMVFDAAFSSSLKR 61
+L+++RHG+ WN +N F + L S GM EA GK L FD F+S L R
Sbjct: 3 KYKLIMLRHGEGAWNKENRFCSWVDQKLNSEGMEEARNCGKQLKALNFEFDLVFTSVLNR 62
Query: 62 AQDTCQIILQEINQQHITPIYDDALNERDYGHIAGMNKDDVCNKWGAEQVHLWRRSYSVA 121
+ T +IL+E+ Q+ + LNER YG + G+N++ + G EQV LWRRSY+V
Sbjct: 63 SIHTAWLILEELGQEWVPVESSWRLNERHYGALIGLNREQMALNHGEEQVRLWRRSYNVT 122
Query: 122 P-----------------------------PGGESLRDTVARVLAYYVQFILPLILQNKS 152
P P ESL+D + R+L Y+ + I P +L+ K+
Sbjct: 123 PPPIEESHPYYQEIYNDRRYKVCDVPLDQLPRSESLKDVLERLLPYWNERIAPEVLRGKT 182
Query: 153 ILVVAHGNSLRSLIMVLEKITVDDIPKVTIGTGEAFVYQLGADASIVSKN 202
IL+ AHGNS R+L+ LE I+ +DI +T+ TG + +L + V +
Sbjct: 183 ILISAHGNSSRALLKHLEGISDEDIINITLPTGVPILLELDENLRAVGPH 232
>1yfk_A Phosphoglycerate mutase 1; alpha/beta, isomerase, hydrolase; HET:
CIT; 2.70A {Homo sapiens} PDB: 1yjx_A*
Length = 262
Score = 151 bits (381), Expect = 1e-37
Identities = 79/227 (34%), Positives = 117/227 (51%), Gaps = 27/227 (11%)
Query: 2 NRRLVLVRHGQSEWNIKNLFTGLRNPPLTSIGMSEANEIGKLLAKQGMVFDAAFSSSLKR 61
+LVL+RHG+S WN++N F+G + L+ G EA G+ L G FD F+S KR
Sbjct: 3 AYKLVLIRHGESAWNLENRFSGWYDADLSPAGHEEAKRGGQALRDAGYEFDICFTSVQKR 62
Query: 62 AQDTCQIILQEINQQHITPIYDDALNERDYGHIAGMNKDDVCNKWGAEQVHLWRRSYSVA 121
A T +L I+Q + + LNER YG + G+NK + K G QV +WRRSY V
Sbjct: 63 AIRTLWTVLDAIDQMWLPVVRTWRLNERHYGGLTGLNKAETAAKHGEAQVKIWRRSYDVP 122
Query: 122 P---------------------------PGGESLRDTVARVLAYYVQFILPLILQNKSIL 154
P P ESL+DT+AR L ++ + I+P I + K +L
Sbjct: 123 PPPMEPDHPFYSNISKDRRYADLTEDQLPSCESLKDTIARALPFWNEEIVPQIKEGKRVL 182
Query: 155 VVAHGNSLRSLIMVLEKITVDDIPKVTIGTGEAFVYQLGADASIVSK 201
+ AHGNSLR ++ LE ++ + I ++ + TG VY+L + +
Sbjct: 183 IAAHGNSLRGIVKHLEGLSEEAIMELNLPTGIPIVYELDKNLKPIKP 229
>2axn_A 6-phosphofructo-2-kinase/fructose-2,6- biphosphatase 3
(6PF-2-K/FRU- 2,6-P2ASE brain/placenta-type...;
bifunctional enzyme, EDTA complex; HET: F6P EDT ADP;
2.10A {Homo sapiens} PDB: 2dwo_A* 2dwp_A* 2i1v_B*
Length = 520
Score = 150 bits (381), Expect = 2e-37
Identities = 41/192 (21%), Positives = 81/192 (42%), Gaps = 14/192 (7%)
Query: 3 RRLVLVRHGQSEWNIKNLFTGLRNPPLTSIGMSEANEIGKLLAKQGMVFDAAFSSSLKRA 62
R + L RHG++E N++ G + L+S G A+ + K + +Q + ++S LK
Sbjct: 247 RTIYLCRHGENEHNLQGRIGG--DSGLSSRGKKFASALSKFVEEQNLKDLRVWTSQLKST 304
Query: 63 QDTCQIILQEINQQHITPIYDDALNERDYGHIAGMNKDDVCNKWGAEQVHLWRRSYSVAP 122
T + + + ALNE D G + +++ + + E + Y
Sbjct: 305 IQTAEAL-------RLPYEQWKALNEIDAGVCEELTYEEIRDTYPEEYALREQDKYYYRY 357
Query: 123 PGGESLRDTVARVLAYYVQFILPLILQNKSILVVAHGNSLRSLIMVLEKITVDDIPKVTI 182
P GES +D V R+ ++ + + +++LV+ H LR L+ + +++P +
Sbjct: 358 PTGESYQDLVQRLEP-----VIMELERQENVLVICHQAVLRCLLAYFLDKSAEEMPYLKC 412
Query: 183 GTGEAFVYQLGA 194
A
Sbjct: 413 PLHTVLKLTPVA 424
>1rii_A 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase;
phosphoglyerate mutase, SH3 domain binding, structural
genomics, TBSGC; 1.70A {Mycobacterium tuberculosis}
SCOP: c.60.1.1
Length = 265
Score = 144 bits (364), Expect = 1e-35
Identities = 76/223 (34%), Positives = 115/223 (51%), Gaps = 23/223 (10%)
Query: 3 RRLVLVRHGQSEWNIKNLFTGLRNPPLTSIGMSEANEIGKLLAKQGMVFDAAFSSSLKRA 62
LVL+RHG+S+WN NLFTG + LT G +EA G+L+A+ ++ D ++S L+RA
Sbjct: 5 GSLVLLRHGESDWNALNLFTGWVDVGLTDKGQAEAVRSGELIAEHDLLPDVLYTSLLRRA 64
Query: 63 QDTCQIILQEINQQHITPIYDDALNERDYGHIAGMNKDDVCNKWGAEQVHLWRRSYSVAP 122
T + L ++ I LNER YG + G++K + ++G EQ WRRSY P
Sbjct: 65 ITTAHLALDSADRLWIPVRRSWRLNERHYGALQGLDKAETKARYGEEQFMAWRRSYDTPP 124
Query: 123 -----------------------PGGESLRDTVARVLAYYVQFILPLILQNKSILVVAHG 159
P E L D VAR L Y+ I+ + K++L+VAHG
Sbjct: 125 PPIERGSQFSQDADPRYADIGGGPLTECLADVVARFLPYFTDVIVGDLRVGKTVLIVAHG 184
Query: 160 NSLRSLIMVLEKITVDDIPKVTIGTGEAFVYQLGADASIVSKN 202
NSLR+L+ L++++ D+I + I TG Y L + + +
Sbjct: 185 NSLRALVKHLDQMSDDEIVGLNIPTGIPLRYDLDSAMRPLVRG 227
>3dcy_A Regulator protein; OMIM 610775, C12ORF5, tigar, TP53-induced
glycolysis and apoptosis regulator, CAsp target,
structural genomics medical relevance; HET: MSE; 1.75A
{Homo sapiens}
Length = 275
Score = 136 bits (342), Expect = 5e-33
Identities = 52/237 (21%), Positives = 79/237 (33%), Gaps = 60/237 (25%)
Query: 3 RRLVLVRHGQSEWNIKNLFTG-LRNPPLTSIGMSEANEIGKLLAKQGMVFDAAFSSSLKR 61
L +VRHG++ +N + + G + PL+ G +A G L + F AFSS L R
Sbjct: 9 FALTVVRHGETRFNKEKIIQGQGVDEPLSETGFKQAAAAGIFLN--NVKFTHAFSSDLMR 66
Query: 62 AQDTCQIILQEINQQHITP-IYDDALNERDYGHIAGMNKDDVCNKWGAEQVHLWRRSYSV 120
+ T IL+ YD L ER YG + G ++ A
Sbjct: 67 TKQTMHGILERSKFCKDMTVKYDSRLRERKYGVVEGKALSELRAMAKAA----REECPVF 122
Query: 121 APPGGES-------------------------------------LRDTVARVLAYYVQFI 143
PPGGE+ L ++A +
Sbjct: 123 TPPGGETLDQVKMRGIDFFEFLCQLILKEADQKEQFSQGSPSNCLETSLAEIFPLGKNHS 182
Query: 144 LPLILQ------NKSILVVAHGNSLRSLIMVL---------EKITVDDIPKVTIGTG 185
+ S+LVV+HG +RSL ++ ++ VT TG
Sbjct: 183 SKVNSDSGIPGLAASVLVVSHGAYMRSLFDYFLTDLKCSLPATLSRSELMSVTPNTG 239
>3e9c_A ZGC:56074; histidine phosphatase, hydrolase; 2.00A {Danio rerio}
PDB: 3e9d_A 3e9e_A
Length = 265
Score = 135 bits (339), Expect = 9e-33
Identities = 46/179 (25%), Positives = 74/179 (41%), Gaps = 16/179 (8%)
Query: 1 MNRRLVLVRHGQSEWNIKNLFTG-LRNPPLTSIGMSEANEIGKLLAKQGMVFDAAFSSSL 59
+ L +VRHG++++N L G + PL+ G +A G+ L + F F S+L
Sbjct: 2 LTFALTIVRHGETQYNRDKLLQGQGIDTPLSDTGHQQAAAAGRYLK--DLHFTNVFVSNL 59
Query: 60 KRAQDTCQIILQEINQQHITP-IYDDALNERDYGHIAGMNKDDVCNKWGAEQVHLWRRSY 118
+RA T +IIL T I D L ER +G G K+ + N A +
Sbjct: 60 QRAIQTAEIILGNNLHSSATEMILDPLLRERGFGVAEGRPKEHLKNMANAA----GQSCR 115
Query: 119 SVAPPGGESLRDTVARVLAYYVQFILPLILQNKSILVVAHGNSLRSLIMVLEKITVDDI 177
PPGGE+L R + + HG++L S+ ++ + +
Sbjct: 116 DYTPPGGETLEQVKTRFKMFLKSLFQRMF--------EEHGSALSSVPSEADQPVIAGL 166
>1h2e_A Phosphatase, YHFR; hydrolase, broad specificity phosphatase, DPGM
homolog; 1.69A {Bacillus stearothermophilus} SCOP:
c.60.1.1 PDB: 1h2f_A* 1ebb_A
Length = 207
Score = 125 bits (315), Expect = 5e-30
Identities = 45/182 (24%), Positives = 78/182 (42%), Gaps = 7/182 (3%)
Query: 4 RLVLVRHGQSEWNIKNLFTGLRNPPLTSIGMSEANEIGKLLAKQGMVFDAAFSSSLKRAQ 63
L L RHG+++WN++ G ++ PLT G +A +GK L + A ++S+ RA
Sbjct: 3 TLYLTRHGETKWNVERRMQGWQDSPLTEKGRQDAMRLGKRLEAVEL--AAIYTSTSGRAL 60
Query: 64 DTCQIILQEINQQHITPIYDDALNERDYGHIAGMNKDDVCNKWGAEQVHLWRRSYSVAPP 123
+T + + I D+ L E G G D++ H W+ + AP
Sbjct: 61 ETAE---IVRGGRLIPIYQDERLREIHLGDWEGKTHDEIRQMDPIAFDHFWQAPHLYAPQ 117
Query: 124 GGESLRDTVARVLAYYVQFILPLILQNKSILVVAHGNSLRSLIMVLEKITVDDIPKVTIG 183
GE D R L + + +++L+V HG L++L+ + +D +
Sbjct: 118 RGERFCDVQQRALEAVQSIVDR--HEGETVLIVTHGVVLKTLMAAFKDTPLDHLWSPPYM 175
Query: 184 TG 185
G
Sbjct: 176 YG 177
>3mbk_A Ubiquitin-associated and SH3 domain-containing PR; PGM, STS-1,
signaling protein, low PH, alternative splicing,
cytoplasm, nucleus, phosphoprotein; 1.35A {Mus musculus}
PDB: 2ikq_A 2h0q_A
Length = 264
Score = 125 bits (314), Expect = 1e-29
Identities = 34/212 (16%), Positives = 64/212 (30%), Gaps = 37/212 (17%)
Query: 3 RRLVLVRHGQSEWNIKN-------------------------------LFTGLRNPPLTS 31
R L + RHG+ + ++ P+T
Sbjct: 1 RCLFVCRHGERMDVVFGKYWLSQCFDAKGRYIRTNLNMPHSLPQRSGGFRDYEKDAPITV 60
Query: 32 IGMSEANEIGKLLAKQGMVFDAAFSSSLKRAQDTCQIILQEINQQHITPIY-DDALNERD 90
G +A +G+ L + V D + S R T IL+ + Q + I + L E
Sbjct: 61 FGCMQARLVGEALLESNTVIDHVYCSPSLRCVQTAHNILKGLQQDNHLKIRVEPGLFEWT 120
Query: 91 YGHIAG-----MNKDDVCNKWGAEQVHLWRRSYSVAPPGGESLRDTVARVLAYYVQFILP 145
+ ++ + ES + R + I
Sbjct: 121 KWVAGSTLPAWIPPSELAAANLSVDTTYRPHIPVSKLAISESYDTYINRSFQVTKEIISE 180
Query: 146 LILQNKSILVVAHGNSLRSLIMVLEKITVDDI 177
+ +IL+VAH +SL + L+ ++ +
Sbjct: 181 CKSKGNNILIVAHASSLEACTCQLQGLSPQNS 212
>3c7t_A Ecdysteroid-phosphate phosphatase; ecdysone, 2H-phosphatase, PGM,
hydrolase; 1.76A {Bombyx mori}
Length = 263
Score = 123 bits (310), Expect = 2e-29
Identities = 28/205 (13%), Positives = 62/205 (30%), Gaps = 32/205 (15%)
Query: 3 RRLVLVRHGQSEWNI-----------------------------KNLFTGLRNPPLTSIG 33
R + +RHG+ +++ PLT +G
Sbjct: 5 RWVFALRHGERVDLTYGPWVPHCFENDTYVRKDLNLPLKLAHRAGGKGGYVKDTPLTRLG 64
Query: 34 MSEANEIGKLLAKQGMVFDAAFSSSLKRAQDTCQIILQEINQQHITPIY-DDALNERDYG 92
+A +G+ + G+ ++S R +T Q L + I + L E
Sbjct: 65 WFQAQLVGEGMRMAGVSIKHVYASPALRCVETAQGFLDGLRADPSVKIKVEPGLFEFKNW 124
Query: 93 HIAGMNK--DDVCNKWGAEQVHLWRRSYSVAPPGGESLRDTVARVLAYYVQFILPLILQN 150
H+ + V + + Y E++ + R +
Sbjct: 125 HMPKGIDFMTPIELCKAGLNVDMTYKPYVEMDASAETMDEFFKRGEVAMQAAVNDTEKDG 184
Query: 151 KSILVVAHGNSLRSLIMVLEKITVD 175
+++ + H +L ++ L ++ D
Sbjct: 185 GNVIFIGHAITLDQMVGALHRLRDD 209
>2h0q_A Suppressor of T-cell receptor signaling 1; PGM, STS-1, signaling
protein; 1.82A {Mus musculus} PDB: 2ikq_A
Length = 261
Score = 118 bits (295), Expect = 1e-27
Identities = 33/212 (15%), Positives = 63/212 (29%), Gaps = 37/212 (17%)
Query: 3 RRLVLVRHGQSEWNI-------------------------------KNLFTGLRNPPLTS 31
R L + RHG+ + ++ P+T
Sbjct: 1 RCLFVCRHGERMDVVFGKYWLSQCFDAKGRYIRTNLNMPHSLPQRSGGFRDYEKDAPITV 60
Query: 32 IGMSEANEIGKLLAKQGMVFDAAFSSSLKRAQDTCQIILQEINQQHITPIYDDA------ 85
G +A +G+ L + V D + S R T IL+ + Q + I +
Sbjct: 61 FGCMQARLVGEALLESNTVIDHVYCSPSLRCVQTAHNILKGLQQDNHLKIRVEPGLFEWT 120
Query: 86 LNERDYGHIAGMNKDDVCNKWGAEQVHLWRRSYSVAPPGGESLRDTVARVLAYYVQFILP 145
A + ++ + ES + R + I
Sbjct: 121 KWVAGSTLPAWIPPSELAAANLSVDTTYRPHIPVSKLAISESYDTYINRSFQVTKEIISE 180
Query: 146 LILQNKSILVVAHGNSLRSLIMVLEKITVDDI 177
+ +IL+VAH +SL + L+ ++ +
Sbjct: 181 CKSKGNNILIVAHASSLEACTCQLQGLSPQNS 212
>2qni_A AGR_C_517P, uncharacterized protein ATU0299; MCSG, in SITU
proteolysis, structural genomics, PSI-2, protein
structure initiative; 1.80A {Agrobacterium tumefaciens
str}
Length = 219
Score = 112 bits (282), Expect = 5e-26
Identities = 33/211 (15%), Positives = 67/211 (31%), Gaps = 15/211 (7%)
Query: 1 MNRRLVLVRHGQSEWNIKNLFTGLRNPPLTSIGMSEANEIGKLLAKQGMVFDAAFSSSLK 60
+ + H Q + + L+ G A E +L + SS+
Sbjct: 20 QGMHALYITHPQVKIDPAVPVPE---WGLSERGAERAREASRLPWAKA--LRRIVSSAET 74
Query: 61 RAQDTCQIILQEINQQHITPIYDDALNERDYGHIAGMNKDDVCNKWGAEQVHLWRRSYSV 120
+A +T ++ + +A++E D + + +
Sbjct: 75 KAIETAHMLAETSG---AAIEIIEAMHENDRSATGFLPPPEFEKAADW-----FFAHPEE 126
Query: 121 APPGGESLRDTVARVLAYYVQFILPLILQNKSILVVAHGNSLRSLIMVLEKITVDDIPKV 180
+ G E D AR++ V+ +L + I V HG L +E +
Sbjct: 127 SFQGWERAIDAQARIVEA-VKAVLDRHDARQPIAFVGHGGVGTLLKCHIEGRGISRSKDQ 185
Query: 181 TIGTGEAFVYQLGADASIVSKNIMRGQSPAE 211
G G F + + A+ S+ + + + E
Sbjct: 186 PAGGGNLFRFSI-AEFSLAAASPTCDWTAME 215
>3d4i_A STS-2 protein; PGM, 2H-phosphatase, PTP, SH3 domain, hydrolase;
1.95A {Mus musculus} PDB: 3d6a_A 3db1_A
Length = 273
Score = 112 bits (279), Expect = 8e-26
Identities = 35/213 (16%), Positives = 67/213 (31%), Gaps = 37/213 (17%)
Query: 3 RRLVLVRHGQSEWNI-------------------------------KNLFTGLRNPPLTS 31
R ++++RHG+ + + +PPL+S
Sbjct: 10 RGILVIRHGERVDQVFGKSWLQQCTTADGKYYRPDLNFPRSLPRRSNGIKDFENDPPLSS 69
Query: 32 IGMSEANEIGKLLAKQGMVFDAAFSSSLKRAQDTCQIILQEINQQHITPIY-DDALNERD 90
G+ +A G+ L G+ A F+S R T + IL+E+ + I + + E
Sbjct: 70 CGIFQARLAGEALLDSGVRVTAVFASPALRCVQTAKHILEELKLEKKLKIRVEPGIFEWM 129
Query: 91 YGHI-----AGMNKDDVCNKWGAEQVHLWRRSYSVAPPGGESLRDTVARVLAYYVQFILP 145
+ +++ + + ES V R Q I
Sbjct: 130 KWEASKATLTFLTLEELKEANFNVDLDYRPALPRCSLMPAESYDQYVERCAVSMGQIINT 189
Query: 146 LILQNKSILVVAHGNSLRSLIMVLEKITVDDIP 178
L+V+H ++L S L + +
Sbjct: 190 CPQDMGITLIVSHSSALDSCTRPLLGLPPRECG 222
>3f3k_A Uncharacterized protein YKR043C; structural genomics,, PSI-2,
protein structure initiative, midwest center for
structural genomics, MCSG; 1.75A {Saccharomyces
cerevisiae}
Length = 265
Score = 111 bits (279), Expect = 8e-26
Identities = 45/209 (21%), Positives = 80/209 (38%), Gaps = 15/209 (7%)
Query: 1 MNRRLVLVRHGQSEWNIKNLFTGLRNPPLTSIGMSEANEIGKLLAKQGMV-----FDAAF 55
+ R ++VRHGQ+EW+ +TGL + PLT G + G+ + + F
Sbjct: 4 LTPRCIIVRHGQTEWSKSGQYTGLTDLPLTPYGEGQMLRTGESVFRNNQFLNPDNITYIF 63
Query: 56 SSSLKRAQDTCQIILQEINQQHITPIY---DDALNERDYGHIAGMNKDDVCNKWGAEQVH 112
+S RA+ T ++L+ ++ + I DD L E +YG GM ++ + +
Sbjct: 64 TSPRLRARQTVDLVLKPLSDEQRAKIRVVVDDDLREWEYGDYEGMLTREIIELRKSRGLD 123
Query: 113 LWRRSYSVAP--PGGESLRDTVARV---LAYYVQFILPLILQ--NKSILVVAHGNSLRSL 165
R GE+ + R+ +A + I+V AHG++LR
Sbjct: 124 KERPWNIWRDGCENGETTQQIGLRLSRAIARIQNLHRKHQSEGRASDIMVFAHGHALRYF 183
Query: 166 IMVLEKITVDDIPKVTIGTGEAFVYQLGA 194
+ + V + Y
Sbjct: 184 AAIWFGLGVQKKCETIEEIQNVKSYDDDT 212
>3mxo_A Serine/threonine-protein phosphatase PGAM5, mitoc; phosphoglycerate
mutase family member 5, BXLBV68, MGC protein, structural
genomics consortium; HET: PG4 PGE PEG; 1.70A {Homo
sapiens}
Length = 202
Score = 109 bits (273), Expect = 6e-25
Identities = 30/183 (16%), Positives = 62/183 (33%), Gaps = 23/183 (12%)
Query: 3 RRLVLVRHGQSEWNIKNLFTGLRNPPLTSIGMSEANEIGKLLAKQGMVFDAAFSSSLKRA 62
R + L+RH Q + + ++ LT +G +A G LA G+ F+ SS+ RA
Sbjct: 11 RHIFLIRHSQYHVD----GSLEKDRTLTPLGREQAELTGLRLASLGLKFNKIVHSSMTRA 66
Query: 63 QDTCQIILQEINQQHITPIYDDALNERDYGHIAGMNKDDVCNKWGAEQVHLWRRSYSVAP 122
+T II + + + + D L E W+
Sbjct: 67 IETTDIISRHLP--GVCKVSTDLLREGAPIEPDPPVSH-------------WKPEAVQYY 111
Query: 123 PGGESLRDTVARVLAYYVQFILPLILQNKSILVVAHGNSLRSLIMVLEKITVDDIPKVTI 182
G + + ++ + + H N +R ++ + + ++++
Sbjct: 112 EDGARIEAAFRNY----IHRADARQEEDSYEIFICHANVIRYIVCRALQFPPEGWLRLSL 167
Query: 183 GTG 185
G
Sbjct: 168 NNG 170
>3eoz_A Putative phosphoglycerate mutase; PGAM, malaria, structural
genomics, isomerase, structural genomics consortium,
SGC; 2.40A {Plasmodium falciparum 3D7}
Length = 214
Score = 102 bits (255), Expect = 6e-23
Identities = 36/186 (19%), Positives = 66/186 (35%), Gaps = 28/186 (15%)
Query: 3 RRLVLVRHGQSEWNIKNLFTGLRNPPLTSIGMSEANEIGKLLAK--QGMVFDAAFSSSLK 60
+ ++LVRHGQ E K+ LT G +A+ GK L + S +
Sbjct: 22 KHIILVRHGQYERRYKDDENS---KRLTKEGCKQADITGKKLKDILNNKKVSVIYHSDMI 78
Query: 61 RAQDTCQIILQEINQQHITPIYDDALNERDYGHIAGMNKDDVCNKWGAEQVHLWRRSYSV 120
RA++T II + ++ I D LNE
Sbjct: 79 RAKETANIISKYFPDANL--INDPNLNEGTPYL--------------------PDPLPRH 116
Query: 121 APPGGESLRDTVARVLAYYVQFIL-PLILQNKSILVVAHGNSLRSLIMVLEKITVDDIPK 179
+ + +++ R+ Y + P +++ LV+ HGN +R + +I + +
Sbjct: 117 SKFDAQKIKEDNKRINKAYETYFYKPSGDEDEYQLVICHGNVIRYFLCRALQIPLFAWLR 176
Query: 180 VTIGTG 185
+
Sbjct: 177 FSSYNC 182
>2a6p_A Possible phosphoglycerate mutase GPM2; predicted phosphoglycerate
mutase, structural genomics, PSI; 2.20A {Mycobacterium
tuberculosis H37RV}
Length = 208
Score = 80.1 bits (196), Expect = 4e-16
Identities = 39/192 (20%), Positives = 73/192 (38%), Gaps = 14/192 (7%)
Query: 1 MNRRLVLVRHGQSEWNIKNLFTGLRNPPLTSIGMSEANEIGKLLAKQGMVFDAAFSSSLK 60
N RL+L+RHG++ W+ TG LT G ++A G+LL + + S +
Sbjct: 9 RNHRLLLLRHGETAWSTLGRHTGGTEVELTDTGRTQAELAGQLLGELELDDPIVICSPRR 68
Query: 61 RAQDTCQIILQEINQQHITPIYDDALNERDYGHIAGMNKDDVCNKWGAEQVHLWRRSYSV 120
R DT ++ +N+ E DYG G+ + V
Sbjct: 69 RTLDTAKLAGLTVNEVTGLLA------EWDYGSYEGLTTPQIRESEPDWLVWTHG----- 117
Query: 121 APPGGESLRDTVARVLAYYVQFILPLILQNKSILVVAHGNSLRSLIMVLEKITVDDIPKV 180
P GES+ R + + + ++ V+HG+ R++I ++ + + +
Sbjct: 118 -CPAGESVAQVNDRADSAVALALEHMSSRDVLF--VSHGHFSRAVITRWVQLPLAEGSRF 174
Query: 181 TIGTGEAFVYQL 192
+ T +
Sbjct: 175 AMPTASIGICGF 186
>1v37_A Phosphoglycerate mutase; riken structural genomics/proteomics
initiative, RSGI, structural genomics, isomerase; 1.40A
{Thermus thermophilus} SCOP: c.60.1.1 PDB: 1v7q_A 2hia_A
2pa0_A 2p2y_A 2p77_A 2p6m_A 2p9y_A 2p30_A 2ekz_A 2p9f_A
2p79_A 2p78_A 2p2z_A 2p75_A 2owe_A 2enu_A 2ekb_A 2p6o_A
2owd_A 2enw_A ...
Length = 177
Score = 75.5 bits (184), Expect = 9e-15
Identities = 41/195 (21%), Positives = 69/195 (35%), Gaps = 26/195 (13%)
Query: 4 RLVLVRHGQSEWNIKNLFTGLRNPPLTSIGMSEANEIGKLLAKQGMVFDAAFSSSLKRAQ 63
L LVRHG++ WN + G + PLT+ G ++A + K + AFSS L RA+
Sbjct: 2 ELWLVRHGETLWNREGRLLGWTDLPLTAEGEAQARRL-----KGALPSLPAFSSDLLRAR 56
Query: 64 DTCQIILQEINQQHITPIYDDALNERDYGHIAGMNKDDVCNKWGAEQVHLWRRSYSVAPP 123
T ++ E +G + G + + ++ + PP
Sbjct: 57 RTAELAGFSPRLYPEL-------REIHFGALEGALWETLDPRYKEALLRFQGF----HPP 105
Query: 124 GGESLRDTVARVLAYYVQFILPLILQNKSILVVAHGNSLRSLIMVL---EKITVDDIPKV 180
GGESL RV + ++ HG +R+++ L + V
Sbjct: 106 GGESLSAFQERVFRFLEGL-------KAPAVLFTHGGVVRAVLRALGEDGLVPPGSAVAV 158
Query: 181 TIGTGEAFVYQLGAD 195
L +
Sbjct: 159 DWPRRVLVRLALDGE 173
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II(PSI
II), NYSGXRC, 11181H, structural genomics; 2.15A
{Bifidobacterium adolescentis ATCC15703}
Length = 364
Score = 71.0 bits (173), Expect = 2e-13
Identities = 25/187 (13%), Positives = 57/187 (30%), Gaps = 43/187 (22%)
Query: 3 RRLVLVRHGQSEWNIKNLFTGLRNPPLTSIGMSEANEIGKLLAKQGMVFDAAFSSSLKRA 62
+ L++VRH ++E K+ N P+T G + A + + LA +S R
Sbjct: 183 QNLLIVRHAKAESR-KSWKGTDANRPITPKGAAMAFALNRELACFN--PTRLATSPWLRC 239
Query: 63 QDTCQIILQEINQQHITPIYDDALNERDYGHIAGMNKDDVCNKWGAEQVHLWRRSYSVAP 122
Q+T Q++ + + + L E + + A
Sbjct: 240 QETLQVLSWQTE---RPMEHINTLTEDAFA------------EHPAVSW----------- 273
Query: 123 PGGESLRDTVARVLAYYVQFILPLILQNKSILVVAHGNSLRSLIMVLEKITVDDIPKVTI 182
+ R+ + + L ++ + H + + L + +
Sbjct: 274 ---LAFREQITQTLN-----------SRETTAICMHRPVIGGMYDHLRGLCARKQLAKQL 319
Query: 183 GTGEAFV 189
++
Sbjct: 320 IAKSPYM 326
>3f2i_A ALR0221 protein; alpha-beta protein, structural genomics, PSI-2,
protein structure initiative, northeast structural
genomics consortium, NESG; 2.00A {Nostoc SP}
Length = 172
Score = 67.9 bits (165), Expect = 2e-12
Identities = 21/92 (22%), Positives = 35/92 (38%), Gaps = 3/92 (3%)
Query: 4 RLVLVRHGQSEWNIKNLFTGLRNPPLTSIGMSEANEIGKLLAKQGMVFDAAFSSSLKRAQ 63
L L+RHG +E + LT G + ++ L K G FD +S L RA+
Sbjct: 2 ELYLIRHGIAEAQKTGI--KDEERELTQEGKQKTEKVAYRLVKLGRQFDLIVTSPLIRAR 59
Query: 64 DTCQIILQEINQQHITPIYDDALNERDYGHIA 95
T +I+L + + + +
Sbjct: 60 QTAEILLASGLSCQLE-ESNHLAPNGNIFNWL 90
>3hjg_A Putative alpha-ribazole-5'-phosphate phosphatase COBC; PSI-2,
NYSGXRC, structural genomics, protein structure
initiative; 2.80A {Vibrio parahaemolyticus}
Length = 213
Score = 64.7 bits (156), Expect = 2e-11
Identities = 32/175 (18%), Positives = 59/175 (33%), Gaps = 12/175 (6%)
Query: 4 RLVLVRHGQSEWNIKNLFTGLRNPPLTSIGMSEANEIGKLLAKQGMVFDAAFSSSLKRAQ 63
+ L+RHG+ + G + + + K G SS L R
Sbjct: 7 NIYLMRHGKVDAA--PGLHGQTDLKVKEAEQQQIAMAWKTK---GYDVAGIISSPLSRCH 61
Query: 64 DTCQIILQEINQQHITPIYDDALNERDYGHIAGMNKDDVCNKWGAEQVHLWRRSYSVAPP 123
D QI+ ++ T ++ D+ + + K W+ + P
Sbjct: 62 DLAQILAEQQLLPMTTEDDLQEMDFGDFDGMPFDLLTEHWKKL----DAFWQSPAHHSLP 117
Query: 124 GGESLRDTVARVLAYYVQFILPLILQNKSILVVAHGNSLRSLIMVLEKITVDDIP 178
ESL RV + Q I N ++L+V HG +R ++ + + +
Sbjct: 118 NAESLSTFSQRVSRAWSQIIND---INDNLLIVTHGGVIRIILAHVLGVDWRNPQ 169
>1ujc_A Phosphohistidine phosphatase SIXA; alpha-beta fold, hydrolase;
1.90A {Escherichia coli} PDB: 1ujb_A
Length = 161
Score = 62.6 bits (151), Expect = 6e-11
Identities = 17/104 (16%), Positives = 38/104 (36%), Gaps = 4/104 (3%)
Query: 4 RLVLVRHGQSEWNIKNLFTGLRNPPLTSIGMSEANEIGKLLAKQGMVFDAAFSSSLKRAQ 63
++ ++RHG + + + PLT+ G E+ + L Q + + S RA+
Sbjct: 2 QVFIMRHGDAALDAASDS----VRPLTTNGCDESRLMANWLKGQKVEIERVLVSPFLRAE 57
Query: 64 DTCQIILQEINQQHITPIYDDALNERDYGHIAGMNKDDVCNKWG 107
T + + +N + + D G ++ +
Sbjct: 58 QTLEEVGDCLNLPSSAEVLPELTPCGDVGLVSAYLQALTNEGVA 101
>2rfl_A Putative phosphohistidine phosphatase SIXA; alpha-beta-alpha
sandwich, structural genomics, PSI-2, protein structure
initiative; 2.35A {Agrobacterium tumefaciens str}
Length = 173
Score = 62.6 bits (151), Expect = 7e-11
Identities = 24/106 (22%), Positives = 36/106 (33%), Gaps = 5/106 (4%)
Query: 1 MNRRLVLVRHGQSEWNIKNLFTGLRNPPLTSIGMSEANEIGKLLAKQGMVFDAAFSSSLK 60
R+ L+RH ++ W R L G +EA I L A + D SS+
Sbjct: 7 FPTRVYLLRHAKAAWAAPGERDFDR--GLNEAGFAEAEIIADLAADRRYRPDLILSSTAA 64
Query: 61 RAQDTCQIILQEIN---QQHITPIYDDALNERDYGHIAGMNKDDVC 103
R + T Q + N +A +E IA +
Sbjct: 65 RCRQTTQAWQRAFNEGIDIVYIDEMYNARSETYLSLIAAQTEVQSV 110
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl reductase,
beta-ketoacyl synthase, dehydratase; 4.00A
{Saccharomyces cerevisiae}
Length = 2006
Score = 42.6 bits (100), Expect = 6e-05
Identities = 37/226 (16%), Positives = 70/226 (30%), Gaps = 94/226 (41%)
Query: 47 QGMVFDAAFSSS------LKRAQDT----------CQIILQEINQQHITP-IYDDALNER 89
QG+V A + + + C + + P I +D+L E
Sbjct: 275 QGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCY---EAYPNTSLPPSILEDSL-EN 330
Query: 90 DYG------HIAGMNKD------DVCNKW--GAEQVHL----WRRSYSVA-PPGGESLR- 129
+ G I+ + ++ + N +QV + ++ V+ PP +SL
Sbjct: 331 NEGVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPP--QSLYG 388
Query: 130 --------------DTVARV------LAYYVQFILPLILQNKSILVVAHGNSLRSLI-MV 168
D +R+ L + +F LP + H + L ++
Sbjct: 389 LNLTLRKAKAPSGLDQ-SRIPFSERKLKFSNRF-LP-------VASPFHSHLLVPASDLI 439
Query: 169 LE-------KITVDD--IPKVTIGTGEAFVY--QLGADASIVSKNI 203
+ D IP VY G+D ++S +I
Sbjct: 440 NKDLVKNNVSFNAKDIQIP----------VYDTFDGSDLRVLSGSI 475
>2j3x_A C2 toxin component I; ADP-ribosyltransferase; 1.75A {Clostridium
botulinum} PDB: 2j3v_A 2j3z_A
Length = 431
Score = 28.7 bits (64), Expect = 1.0
Identities = 9/49 (18%), Positives = 13/49 (26%), Gaps = 6/49 (12%)
Query: 77 HITPIYDDALNERDYGHIAGMN------KDDVCNKWGAEQVHLWRRSYS 119
+ +DY I G + WGAE + S
Sbjct: 194 IPESAIITTIKGKDYILIEGSLSQELDFYNKGSEAWGAENYGDYISKLS 242
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase,
structural genomics consortium, SGC, hemicholinium-3,
alternative splicing, cytoplasm; HET: ADP HC6; 1.70A
{Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A
2ckp_A* 2ckq_A*
Length = 401
Score = 28.0 bits (61), Expect = 1.6
Identities = 21/151 (13%), Positives = 48/151 (31%), Gaps = 11/151 (7%)
Query: 34 MSEANEIGKLLA--KQGMVFDAAFSSSLKRAQDTCQIILQEINQQHITPIYDDALNERDY 91
++E + KL QG + S L + + I EI ++ +
Sbjct: 131 LAERSLGPKLYGIFPQGRLEQFIPSRRLDTEELSLPDISAEIAEK---------MATFHG 181
Query: 92 GHIAGMNKDDVCNKWGAEQVHLWRRSYSVAPPGGESLRDTVARVLAYYVQFILPLILQNK 151
+ + + + R + L ++ L ++ + L+
Sbjct: 182 MKMPFNKEPKWLFGTMEKYLKEVLRIKFTEESRIKKLHKLLSYNLPLELENLRSLLESTP 241
Query: 152 SILVVAHGNSLRSLIMVLEKITVDDIPKVTI 182
S +V H + I++LE + K+ +
Sbjct: 242 SPVVFCHNDCQEGNILLLEGRENSEKQKLML 272
>3it3_A Acid phosphatase; HAP, hydrolase; HET: 3AM; 1.50A {Francisella
tularensis subsp} PDB: 2glc_A 2glb_A 2gla_A 3it0_A*
3it1_A* 3it2_A 2p36_A*
Length = 342
Score = 27.5 bits (60), Expect = 2.6
Identities = 30/166 (18%), Positives = 50/166 (30%), Gaps = 24/166 (14%)
Query: 2 NRRLVLV----RHGQ----SEWNIKNLFTGLRNPPLTSIGMSEANEIGKLLAKQ------ 47
+ +L+ V RHG + N G LT IGM++ +G L K+
Sbjct: 5 SSKLIFVSMITRHGDRAPFANIENANYSWGTELSELTPIGMNQEYNLGLQLRKRYIDKFG 64
Query: 48 ------GMVFDAAFSSSLKRAQDTCQIILQ----EINQQHITPIYDDALNERDYGHIAGM 97
SS R + Q +L I + I +
Sbjct: 65 LLPEHYVDQSIYVLSSHTNRTVVSAQSLLMGLYPAGTGPLIGDGDPAIKDRFQPIPIMTL 124
Query: 98 NKDDVCNKWGAEQVHLWRRSYSVAPPGGESLRDTVARVLAYYVQFI 143
+ D ++ EQ + Y P ++ A A + Q +
Sbjct: 125 SADSRLIQFPYEQYLAVLKKYVYNSPEWQNKTKEAAPNFAKWQQIL 170
>1xww_A Low molecular weight phosphotyrosine protein phosphatase;
hydrolase; 1.63A {Homo sapiens} PDB: 1bvh_A 1dg9_A*
1phr_A 1pnt_A 1z12_A 1z13_A 1c0e_A 2p4u_A 5pnt_A*
Length = 157
Score = 27.1 bits (59), Expect = 3.0
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 151 KSILVVAHGNSLRS 164
KS+L V GN RS
Sbjct: 6 KSVLFVCLGNICRS 19
>1fsu_A N-acetylgalactosamine-4-sulfatase; glycosaminoglycan degradation,
hydrolase, signal, glycoprotein, lysosome; HET: ALS
NAG; 2.50A {Homo sapiens} SCOP: c.76.1.2
Length = 492
Score = 27.0 bits (58), Expect = 3.3
Identities = 5/16 (31%), Positives = 9/16 (56%)
Query: 44 LAKQGMVFDAAFSSSL 59
LA G++ D ++ L
Sbjct: 34 LAAGGVLLDNYYTQPL 49
>1p8a_A Protein tyrosine phosphatase; hydrolase; NMR {Tritrichomonas
foetus} SCOP: c.44.1.1
Length = 146
Score = 26.9 bits (59), Expect = 3.6
Identities = 9/39 (23%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 149 QNKSILVVAHGNSLRSLI--MVLEKITVDDIPKVTIGTG 185
+ K++L V GN RS + + D + + T
Sbjct: 3 EKKAVLFVCLGNICRSPACEGICRDMVGDKLIIDSAATS 41
>3b5q_A Putative sulfatase YIDJ; NP_810509.1, structural genomics, joint
center for structural genomics, JCSG; HET: EPE; 2.40A
{Bacteroides thetaiotaomicron vpi-5482}
Length = 482
Score = 26.7 bits (57), Expect = 3.9
Identities = 4/15 (26%), Positives = 9/15 (60%)
Query: 44 LAKQGMVFDAAFSSS 58
+A +G++F A+
Sbjct: 48 VASRGVIFSNAYVGC 62
>2vqr_A Putative sulfatase; phosphonate monoester hydrolase, hydrolase,
plasmid, formylglycine, phosphodiesterase; 1.42A
{Rhizobium leguminosarum BV}
Length = 543
Score = 26.7 bits (57), Expect = 4.1
Identities = 3/15 (20%), Positives = 8/15 (53%)
Query: 44 LAKQGMVFDAAFSSS 58
L ++G+ F ++
Sbjct: 69 LCREGVTFRNHVTTC 83
>1p49_A Steryl-sulfatase; steroid biosynthesis, steroid sulfatase,
estrone sulfate, dehydroepiandrosterone sulfate, human
placental enzyme; HET: ALS BOG NAG; 2.60A {Homo
sapiens} SCOP: c.76.1.2
Length = 562
Score = 26.6 bits (57), Expect = 4.4
Identities = 4/15 (26%), Positives = 7/15 (46%)
Query: 44 LAKQGMVFDAAFSSS 58
LA G+ ++S
Sbjct: 37 LASGGVKLTQHLAAS 51
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase;
1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A
1z2e_A 2ipa_B
Length = 139
Score = 26.4 bits (57), Expect = 5.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 148 LQNKSILVVAHGNSLRS 164
++NK I + GNS RS
Sbjct: 1 MENKIIYFLCTGNSCRS 17
>1auk_A Arylsulfatase A; cerebroside-3-sulfate hydrolysis, lysosomal
enzyme, hydrolase; HET: NDG NAG; 2.10A {Homo sapiens}
SCOP: c.76.1.2 PDB: 1n2k_A* 1n2l_A* 1e1z_P* 1e2s_P*
1e3c_P* 1e33_P*
Length = 489
Score = 26.3 bits (56), Expect = 5.2
Identities = 4/15 (26%), Positives = 6/15 (40%)
Query: 44 LAKQGMVFDAAFSSS 58
LA G+ F +
Sbjct: 34 LAAGGLRFTDFYVPV 48
>2qzu_A Putative sulfatase YIDJ; Q64XZ4_bacfr, arylsulfatase, BFR123,
NESG, structural genomics, PSI-2, protein structure
initiative; 1.70A {Bacteroides fragilis YCH46}
Length = 491
Score = 26.2 bits (56), Expect = 6.1
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 44 LAKQGMVFDAAFSSS 58
LA +G+ F A SS
Sbjct: 59 LASEGINFTNAISSY 73
>2gi4_A Possible phosphotyrosine protein phosphatase; low molecular weight,
protein tyrosine phosphatase, bacterial phosphatase; NMR
{Campylobacter jejuni}
Length = 156
Score = 26.0 bits (56), Expect = 6.3
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 151 KSILVVAHGNSLRS 164
K IL + GN RS
Sbjct: 2 KKILFICLGNICRS 15
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA;
3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Length = 660
Score = 25.8 bits (56), Expect = 7.0
Identities = 8/39 (20%), Positives = 13/39 (33%), Gaps = 6/39 (15%)
Query: 66 CQIILQEINQQHITPIYDDALNERDYGHIAGMNKDDVCN 104
Q+IL + I + D +R + I D
Sbjct: 513 TQLILNLVEGSPIK-LIDGGKQKRCFTDI-----RDGIE 545
>1hdh_A Arylsulfatase; hydrolase, formylglycine hydrate; 1.3A
{Pseudomonas aeruginosa} SCOP: c.76.1.2
Length = 536
Score = 25.8 bits (55), Expect = 7.2
Identities = 4/16 (25%), Positives = 7/16 (43%)
Query: 44 LAKQGMVFDAAFSSSL 59
LA G+ ++S
Sbjct: 35 LAIAGLRLTDFHTAST 50
>3ed4_A Arylsulfatase; structural genomics, PSI-2, protein structure
initiative, NEW YORK structural genomix research
consortium NYSGXRC, transferase; 1.70A {Escherichia
coli}
Length = 502
Score = 25.7 bits (55), Expect = 7.6
Identities = 4/15 (26%), Positives = 10/15 (66%)
Query: 44 LAKQGMVFDAAFSSS 58
LA++G+ F ++ +
Sbjct: 59 LAQEGVKFTDYYAPA 73
>2wja_A Putative acid phosphatase WZB; hydrolase; 2.50A {Escherichia coli}
Length = 168
Score = 25.5 bits (55), Expect = 8.5
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 151 KSILVVAHGNSLRS 164
SILV+ GN RS
Sbjct: 27 DSILVICTGNICRS 40
>3fho_A ATP-dependent RNA helicase DBP5; mRNA export, ATPase, translation
termination, ATP-binding, cytoplasm, hydrolase,
membrane; 2.80A {Schizosaccharomyces pombe}
Length = 508
Score = 25.4 bits (55), Expect = 9.4
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 24 LRNPPLTSIGMSEANEIGKLLAKQGMVFDAAFSSSLKRAQDTCQIILQEINQQ 76
L NPP IG S++ GK A + + +S+ + Q C +E+ +Q
Sbjct: 154 LSNPPRNMIGQSQSG-TGK-TAAFALTMLSRVDASVPKPQAICLAPSRELARQ 204
>2fek_A Low molecular weight protein-tyrosine- phosphatase WZB; phosphate
binding, hydrolase; NMR {Escherichia coli K12}
Length = 167
Score = 25.5 bits (55), Expect = 10.0
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 151 KSILVVAHGNSLRS 164
+ILVV GN RS
Sbjct: 23 NNILVVCVGNICRS 36
Database: pdb70
Posted date: Jan 26, 2011 11:21 AM
Number of letters in database: 5,693,230
Number of sequences in database: 24,244
Lambda K H
0.319 0.135 0.393
Gapped
Lambda K H
0.267 0.0582 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24244
Number of Hits to DB: 1,781,411
Number of extensions: 78843
Number of successful extensions: 356
Number of sequences better than 10.0: 1
Number of HSP's gapped: 313
Number of HSP's successfully gapped: 66
Length of query: 212
Length of database: 5,693,230
Length adjustment: 88
Effective length of query: 124
Effective length of database: 3,559,758
Effective search space: 441409992
Effective search space used: 441409992
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (24.9 bits)