RPS-BLAST 2.2.22 [Sep-27-2009]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= gi|254780278|ref|YP_003064691.1| phosphoglyceromutase
[Candidatus Liberibacter asiaticus str. psy62]
(212 letters)
>d1fzta_ c.60.1.1 (A:) Phosphoglycerate mutase {Fission yeast
(Schizosaccharomyces pombe) [TaxId: 4896]}
Length = 211
Score = 165 bits (419), Expect = 2e-42
Identities = 107/201 (53%), Positives = 137/201 (68%)
Query: 3 RRLVLVRHGQSEWNIKNLFTGLRNPPLTSIGMSEANEIGKLLAKQGMVFDAAFSSSLKRA 62
LVL RHG+SEWN NLFTG ++P L+ G+ EA G+ L +G FD AF+S+L+RA
Sbjct: 8 NLLVLTRHGESEWNKLNLFTGWKDPALSETGIKEAKLGGERLKSRGYKFDIAFTSALQRA 67
Query: 63 QDTCQIILQEINQQHITPIYDDALNERDYGHIAGMNKDDVCNKWGAEQVHLWRRSYSVAP 122
Q TCQIIL+E+ + ++ I + LNER YG + G+NKDD KWGAEQV +WRRSY +AP
Sbjct: 68 QKTCQIILEEVGEPNLETIKSEKLNERYYGDLQGLNKDDARKKWGAEQVQIWRRSYDIAP 127
Query: 123 PGGESLRDTVARVLAYYVQFILPLILQNKSILVVAHGNSLRSLIMVLEKITVDDIPKVTI 182
P GESL+DT RVL YY I+P IL+ + +L+ AHGNSLR+LIM LE +T D I K +
Sbjct: 128 PNGESLKDTAERVLPYYKSTIVPHILKGEKVLIAAHGNSLRALIMDLEGLTGDQIVKREL 187
Query: 183 GTGEAFVYQLGADASIVSKNI 203
TG VY L D VSK +
Sbjct: 188 ATGVPIVYHLDKDGKYVSKEL 208
>d1e58a_ c.60.1.1 (A:) Phosphoglycerate mutase {Escherichia coli
[TaxId: 562]}
Length = 247
Score = 160 bits (405), Expect = 8e-41
Identities = 81/234 (34%), Positives = 125/234 (53%), Gaps = 25/234 (10%)
Query: 4 RLVLVRHGQSEWNIKNLFTGLRNPPLTSIGMSEANEIGKLLAKQGMVFDAAFSSSLKRAQ 63
+LVLVRHG+S+WN +N FTG + L+ G+SEA GKLL ++G FD A++S LKRA
Sbjct: 4 KLVLVRHGESQWNKENRFTGWYDVDLSEKGVSEAKAAGKLLKEEGYSFDFAYTSVLKRAI 63
Query: 64 DTCQIILQEINQQHITPIYDDALNERDYGHIAGMNKDDVCNKWGAEQVHLWRRSYSVAP- 122
T +L E++Q + LNER YG + G+NK + K+G EQV WRR ++V P
Sbjct: 64 HTLWNVLDELDQAWLPVEKSWKLNERHYGALQGLNKAETAEKYGDEQVKQWRRGFAVTPP 123
Query: 123 ------------------------PGGESLRDTVARVLAYYVQFILPLILQNKSILVVAH 158
P ESL T+ RV+ Y+ + ILP + + +++ AH
Sbjct: 124 ELTKDDERYPGHDPRYAKLSEKELPLTESLALTIDRVIPYWNETILPRMKSGERVIIAAH 183
Query: 159 GNSLRSLIMVLEKITVDDIPKVTIGTGEAFVYQLGADASIVSKNIMRGQSPAEK 212
GNSLR+L+ L+ ++ ++I ++ I TG VY+ + + + +
Sbjct: 184 GNSLRALVKYLDNMSEEEILELNIPTGVPLVYEFDENFKPLKRYYLGNADEIAA 237
>d1xq9a_ c.60.1.1 (A:) Phosphoglycerate mutase {Plasmodium
falciparum [TaxId: 5833]}
Length = 241
Score = 147 bits (372), Expect = 6e-37
Identities = 83/225 (36%), Positives = 118/225 (52%), Gaps = 25/225 (11%)
Query: 2 NRRLVLVRHGQSEWNIKNLFTGLRNPPLTSIGMSEANEIGKLLAKQGMVFDAAFSSSLKR 61
LVL+RHG+S WN +N FTG + PL+ G EA GK L ++ FD ++S LKR
Sbjct: 3 TYTLVLLRHGESTWNKENKFTGWTDVPLSEKGEEEAIAAGKYLKEKNFKFDVVYTSVLKR 62
Query: 62 AQDTCQIILQEINQQHITPIYDDALNERDYGHIAGMNKDDVCNKWGAEQVHLWRRSYSVA 121
A T +L+ + H+ + LNER YG + G+NK + K+G EQV +WRRSY +
Sbjct: 63 AICTAWNVLKTADLLHVPVVKTWRLNERHYGSLQGLNKSETAKKYGEEQVKIWRRSYDIP 122
Query: 122 P-------------------------PGGESLRDTVARVLAYYVQFILPLILQNKSILVV 156
P P E L+DTV RVL ++ I P IL NK ++V
Sbjct: 123 PPKLDKEDNRWPGHNVVYKNVPKDALPFTECLKDTVERVLPFWFDHIAPDILANKKVMVA 182
Query: 157 AHGNSLRSLIMVLEKITVDDIPKVTIGTGEAFVYQLGADASIVSK 201
AHGNSLR L+ L+ ++ D+ ++ I TG VY+L + +
Sbjct: 183 AHGNSLRGLVKHLDNLSEADVLELNIPTGVPLVYELDENLKPIKH 227
>d2hhja1 c.60.1.1 (A:3-250) Phosphoglycerate mutase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 248
Score = 140 bits (354), Expect = 7e-35
Identities = 79/228 (34%), Positives = 118/228 (51%), Gaps = 29/228 (12%)
Query: 4 RLVLVRHGQSEWNIKNLFTGLRNPPLTSIGMSEANEIGKLLAKQGMVFDAAFSSSLKRAQ 63
+L+++RHG+ WN +N F + L S GM EA GK L FD F+S L R+
Sbjct: 3 KLIMLRHGEGAWNKENRFCSWVDQKLNSEGMEEARNCGKQLKALNFEFDLVFTSVLNRSI 62
Query: 64 DTCQIILQEINQQHITPIYDDALNERDYGHIAGMNKDDVCNKWGAEQVHLWRRSYSVAP- 122
T +IL+E+ Q+ + LNER YG + G+N++ + G EQV LWRRSY+V P
Sbjct: 63 HTAWLILEELGQEWVPVESSWRLNERHYGALIGLNREQMALNHGEEQVRLWRRSYNVTPP 122
Query: 123 ----------------------------PGGESLRDTVARVLAYYVQFILPLILQNKSIL 154
P ESL+D + R+L Y+ + I P +L+ K+IL
Sbjct: 123 PIEESHPYYQEIYNDRRYKVCDVPLDQLPRSESLKDVLERLLPYWNERIAPEVLRGKTIL 182
Query: 155 VVAHGNSLRSLIMVLEKITVDDIPKVTIGTGEAFVYQLGADASIVSKN 202
+ AHGNS R+L+ LE I+ +DI +T+ TG + +L + V +
Sbjct: 183 ISAHGNSSRALLKHLEGISDEDIINITLPTGVPILLELDENLRAVGPH 230
>d1qhfa_ c.60.1.1 (A:) Phosphoglycerate mutase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 240
Score = 139 bits (351), Expect = 2e-34
Identities = 79/224 (35%), Positives = 116/224 (51%), Gaps = 25/224 (11%)
Query: 4 RLVLVRHGQSEWNIKNLFTGLRNPPLTSIGMSEANEIGKLLAKQGMVFDAAFSSSLKRAQ 63
+LVLVRHGQSEWN KNLFTG + L++ G EA G+LL ++ + D ++S L RA
Sbjct: 2 KLVLVRHGQSEWNEKNLFTGWVDVKLSAKGQQEAARAGELLKEKKVYPDVLYTSKLSRAI 61
Query: 64 DTCQIILQEINQQHITPIYDDALNERDYGHIAGMNKDDVCNKWGAEQVHLWRRSYSVAP- 122
T I L++ ++ I LNER YG + G +K + K+G E+ + +RRS+ V P
Sbjct: 62 QTANIALEKADRLWIPVNRSWRLNERHYGDLQGKDKAETLKKFGEEKFNTYRRSFDVPPP 121
Query: 123 ------------------------PGGESLRDTVARVLAYYVQFILPLILQNKSILVVAH 158
P ESL + R+L Y+ I +L K++++ AH
Sbjct: 122 PIDASSPFSQKGDERYKYVDPNVLPETESLALVIDRLLPYWQDVIAKDLLSGKTVMIAAH 181
Query: 159 GNSLRSLIMVLEKITVDDIPKVTIGTGEAFVYQLGADASIVSKN 202
GNSLR L+ LE I+ DI K+ I TG V++L + +
Sbjct: 182 GNSLRGLVKHLEGISDADIAKLNIPTGIPLVFELDENLKPSKPS 225
>d1riia_ c.60.1.1 (A:) Phosphoglycerate mutase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 243
Score = 138 bits (347), Expect = 5e-34
Identities = 75/223 (33%), Positives = 114/223 (51%), Gaps = 23/223 (10%)
Query: 3 RRLVLVRHGQSEWNIKNLFTGLRNPPLTSIGMSEANEIGKLLAKQGMVFDAAFSSSLKRA 62
LVL+RHG+S+WN NLFTG + LT G +EA G+L+A+ ++ D ++S L+RA
Sbjct: 4 GSLVLLRHGESDWNALNLFTGWVDVGLTDKGQAEAVRSGELIAEHDLLPDVLYTSLLRRA 63
Query: 63 QDTCQIILQEINQQHITPIYDDALNERDYGHIAGMNKDDVCNKWGAEQVHLWRRSYSV-- 120
T + L ++ I LNER YG + G++K + ++G EQ WRRSY
Sbjct: 64 ITTAHLALDSADRLWIPVRRSWRLNERHYGALQGLDKAETKARYGEEQFMAWRRSYDTPP 123
Query: 121 ---------------------APPGGESLRDTVARVLAYYVQFILPLILQNKSILVVAHG 159
P E L D VAR L Y+ I+ + K++L+VAHG
Sbjct: 124 PPIERGSQFSQDADPRYADIGGGPLTECLADVVARFLPYFTDVIVGDLRVGKTVLIVAHG 183
Query: 160 NSLRSLIMVLEKITVDDIPKVTIGTGEAFVYQLGADASIVSKN 202
NSLR+L+ L++++ D+I + I TG Y L + + +
Sbjct: 184 NSLRALVKHLDQMSDDEIVGLNIPTGIPLRYDLDSAMRPLVRG 226
>d1bifa2 c.60.1.4 (A:250-468)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
phosphatase domain {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 219
Score = 101 bits (252), Expect = 5e-23
Identities = 39/188 (20%), Positives = 78/188 (41%), Gaps = 16/188 (8%)
Query: 5 LVLVRHGQSEWNIKNLFTGLRNPPLTSIGMSEANEIGKLLAKQGMVFDAAFSSSLKRAQD 64
+ L RHG+SE N+K G +P L+ G + + + ++ Q + F+S +KR
Sbjct: 2 IYLCRHGESELNLKGRIGG--DPGLSPRGREFSKHLAQFISDQNIKDLKVFTSQMKRTIQ 59
Query: 65 TCQIILQEINQQHITPIYDDALNERDYGHIAGMNKDDVCNKWGAEQVHLWRRSYSVAPPG 124
T + + Q + D + E M +++ + + E + Y P
Sbjct: 60 TAEALSVPYEQFKVLNEIDAGVCEE-------MTYEEIQDHYPLEFALRDQDKYRYRYPK 112
Query: 125 GESLRDTVARVLAYYVQFILPLILQNKSILVVAHGNSLRSLIMVLEKITVDDIPKVTIGT 184
GES D V R+ ++ + + +++LV+ H +R L+ +++P +
Sbjct: 113 GESYEDLVQRLEPVIME-----LERQENVLVICHQAVMRCLLAYFLDKAAEELPYLKCPL 167
Query: 185 GEAFVYQL 192
V +L
Sbjct: 168 HT--VLKL 173
>d1h2ea_ c.60.1.1 (A:) Broad specificity phosphatase PhoE (YhfR)
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 207
Score = 86.6 bits (213), Expect = 1e-18
Identities = 41/182 (22%), Positives = 71/182 (39%), Gaps = 7/182 (3%)
Query: 4 RLVLVRHGQSEWNIKNLFTGLRNPPLTSIGMSEANEIGKLLAKQGMVFDAAFSSSLKRAQ 63
L L RHG+++WN++ G ++ PLT G +A +GK L + +S
Sbjct: 3 TLYLTRHGETKWNVERRMQGWQDSPLTEKGRQDAMRLGKRLEAVELAAIYTSTS-----G 57
Query: 64 DTCQIILQEINQQHITPIYDDALNERDYGHIAGMNKDDVCNKWGAEQVHLWRRSYSVAPP 123
+ + I D+ L E G G D++ H W+ + AP
Sbjct: 58 RALETAEIVRGGRLIPIYQDERLREIHLGDWEGKTHDEIRQMDPIAFDHFWQAPHLYAPQ 117
Query: 124 GGESLRDTVARVLAYYVQFILPLILQNKSILVVAHGNSLRSLIMVLEKITVDDIPKVTIG 183
GE D R L + + +++L+V HG L++L+ + +D +
Sbjct: 118 RGERFCDVQQRALEAVQSIVDR--HEGETVLIVTHGVVLKTLMAAFKDTPLDHLWSPPYM 175
Query: 184 TG 185
G
Sbjct: 176 YG 177
>d1v37a_ c.60.1.1 (A:) Alpha-ribazole-5'-phosphate phosphatase
{Thermus thermophilus [TaxId: 274]}
Length = 171
Score = 72.8 bits (177), Expect = 2e-14
Identities = 43/192 (22%), Positives = 70/192 (36%), Gaps = 26/192 (13%)
Query: 4 RLVLVRHGQSEWNIKNLFTGLRNPPLTSIGMSEANEIGKLLAKQGMVFDAAFSSSLKRAQ 63
L LVRHG++ WN + G + PLT+ G ++A K + AFSS L RA+
Sbjct: 2 ELWLVRHGETLWNREGRLLGWTDLPLTAEGEAQARR-----LKGALPSLPAFSSDLLRAR 56
Query: 64 DTCQIILQEINQQHITPIYDDALNERDYGHIAGMNKDDVCNKWGAEQVHLWRRSYSVAPP 123
T ++ +P L E +G + G + + ++ + PP
Sbjct: 57 RTAEL-------AGFSPRLYPELREIHFGALEGALWETLDPRYKEALLRFQGF----HPP 105
Query: 124 GGESLRDTVARVLAYYVQFILPLILQNKSILVVAHGNSLRSLIMVL---EKITVDDIPKV 180
GGESL RV + ++ HG +R+++ L + V
Sbjct: 106 GGESLSAFQERVFRFLEGL-------KAPAVLFTHGGVVRAVLRALGEDGLVPPGSAVAV 158
Query: 181 TIGTGEAFVYQL 192
L
Sbjct: 159 DWPRRVLVRLAL 170
>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 381
Score = 28.3 bits (63), Expect = 0.46
Identities = 10/49 (20%), Positives = 21/49 (42%), Gaps = 5/49 (10%)
Query: 113 LWRRSYSVAPPGGESLRDTVARVLAYYVQFILPLILQNKSILVVAHGNS 161
++ ++ + PP G + R Y + LI + ++ V+A S
Sbjct: 258 SFQETFDITPPFG-----QIVRFPYMYKVTLSGLIEPDANVNVLASSCS 301
>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde
dehydrogenase {Escherichia coli [TaxId: 562]}
Length = 146
Score = 28.1 bits (62), Expect = 0.61
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 4/68 (5%)
Query: 29 LTSIGMSEANEIGKLLAKQGMVFDAAFSSSLKRAQDTCQIILQEINQQHITPIYDDALNE 88
+T G NEI L + G ++S R +D IIL +NQ I D LN
Sbjct: 70 VTCQGGDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVI----TDGLNN 125
Query: 89 RDYGHIAG 96
+ G
Sbjct: 126 GIRTFVGG 133
>d1jl3a_ c.44.1.1 (A:) Arsenate reductase ArsC {Bacillus subtilis
[TaxId: 1423]}
Length = 137
Score = 27.6 bits (60), Expect = 0.89
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 150 NKSILVVAHGNSLRS 164
NK I + GNS RS
Sbjct: 1 NKIIYFLCTGNSCRS 15
>d1ihpa_ c.60.1.2 (A:) Phytase
(myo-inositol-hexakisphosphate-3-phosphohydrolase)
{Aspergillus ficuum [TaxId: 5058]}
Length = 438
Score = 27.5 bits (60), Expect = 0.94
Identities = 19/180 (10%), Positives = 36/180 (20%), Gaps = 32/180 (17%)
Query: 6 VLVRHG-------------QSEWNIKNLFTGLRNPP--------------LTSIGMSEAN 38
VL RHG I+ T LT G E
Sbjct: 49 VLSRHGARYPTDSKGKKYSALIEEIQQNATTFDGKYAFLKTYNYSLGADDLTPFGEQELV 108
Query: 39 EIGKLLAKQ-GMVFDA----AFSSSLKRAQDTCQIILQEINQQHITPIYDDALNERDYGH 93
G ++ + SS R + + ++ +
Sbjct: 109 NSGIKFYQRYESLTRNIVPFIRSSGSSRVIASGKKFIEGFQSTKLKDPRAQPGQSSPKID 168
Query: 94 IAGMNKDDVCNKWGAEQVHLWRRSYSVAPPGGESLRDTVARVLAYYVQFILPLILQNKSI 153
+ N ++ S V + + + L + +
Sbjct: 169 VVISEASSSNNTLDPGTCTVFEDSELADTVEANFTATFVPSIRQRLENDLSGVTLTDTEV 228
>d1fsua_ c.76.1.2 (A:) Arylsulfatase B (4-sulfatase) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 492
Score = 27.0 bits (58), Expect = 1.1
Identities = 5/16 (31%), Positives = 9/16 (56%)
Query: 44 LAKQGMVFDAAFSSSL 59
LA G++ D ++ L
Sbjct: 34 LAAGGVLLDNYYTQPL 49
>d1dg9a_ c.44.1.1 (A:) Tyrosine phosphatase {Cow (Bos taurus)
[TaxId: 9913]}
Length = 157
Score = 27.1 bits (59), Expect = 1.3
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 151 KSILVVAHGNSLRS 164
KS+L V GN RS
Sbjct: 6 KSVLFVCLGNICRS 19
>d1p49a_ c.76.1.2 (A:) Steryl-sulfatase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 553
Score = 26.7 bits (57), Expect = 1.4
Identities = 4/15 (26%), Positives = 7/15 (46%)
Query: 44 LAKQGMVFDAAFSSS 58
LA G+ ++S
Sbjct: 36 LASGGVKLTQHLAAS 50
>d1p8aa_ c.44.1.1 (A:) Tyrosine phosphatase {Tritrichomonas foetus
[TaxId: 5724]}
Length = 146
Score = 26.3 bits (57), Expect = 1.9
Identities = 9/39 (23%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 149 QNKSILVVAHGNSLRSLI--MVLEKITVDDIPKVTIGTG 185
+ K++L V GN RS + + D + + T
Sbjct: 3 EKKAVLFVCLGNICRSPACEGICRDMVGDKLIIDSAATS 41
>d1auka_ c.76.1.2 (A:) Arylsulfatase A {Human (Homo sapiens)
[TaxId: 9606]}
Length = 485
Score = 26.3 bits (56), Expect = 1.9
Identities = 4/15 (26%), Positives = 6/15 (40%)
Query: 44 LAKQGMVFDAAFSSS 58
LA G+ F +
Sbjct: 34 LAAGGLRFTDFYVPV 48
>d1hdha_ c.76.1.2 (A:) Arylsulfatase B (4-sulfatase) {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 525
Score = 25.5 bits (54), Expect = 3.3
Identities = 4/16 (25%), Positives = 7/16 (43%)
Query: 44 LAKQGMVFDAAFSSSL 59
LA G+ ++S
Sbjct: 33 LAIAGLRLTDFHTAST 48
>d1wura1 d.96.1.1 (A:32-216) GTP cyclohydrolase I {Thermus
thermophilus [TaxId: 274]}
Length = 185
Score = 24.6 bits (53), Expect = 6.4
Identities = 10/54 (18%), Positives = 21/54 (38%)
Query: 123 PGGESLRDTVARVLAYYVQFILPLILQNKSILVVAHGNSLRSLIMVLEKITVDD 176
PG E L T RV + + + ++ A + S ++V++ +
Sbjct: 22 PGREGLLKTPERVAKAWAFLTRGYRQRLEEVVGGAVFPAEGSEMVVVKGVEFYS 75
>d1jf8a_ c.44.1.1 (A:) Arsenate reductase ArsC {Staphylococcus
aureus [TaxId: 1280]}
Length = 130
Score = 24.5 bits (52), Expect = 6.5
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 151 KSILVVAHGNSLRS 164
K+I ++ GNS RS
Sbjct: 3 KTIYFISTGNSARS 16
>d1cfra_ c.52.1.7 (A:) Restriction endonuclease Cfr10I {Citrobacter
freundii [TaxId: 546]}
Length = 283
Score = 24.5 bits (53), Expect = 7.7
Identities = 8/52 (15%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Query: 53 AAFSSSLKRAQDTCQIILQ--EINQQHITPIYDDALNERDYGHIAGMNKDDV 102
+ +T I+++ + IY L+E Y + ++ ++V
Sbjct: 75 GIRAIEFFLESETNFIVVKMPNATSFDVMSIYKSCLSEFIYDLRSKLSLNNV 126
>d1zrra1 b.82.1.6 (A:1-179) Acireductone dioxygenase {Klebsiella
pneumoniae [TaxId: 573]}
Length = 179
Score = 24.4 bits (53), Expect = 8.3
Identities = 17/98 (17%), Positives = 34/98 (34%), Gaps = 20/98 (20%)
Query: 26 NPPLTSIGMSEANEIGKLLAKQGMVFDAAFSSSLKRAQDTCQIILQEINQQHITPIYDDA 85
+P + + A EI + L +G+ F+ + A T + ++ Y A
Sbjct: 10 DPQNSLWHSTNAEEIQQQLNAKGVRFERWQADRDLGAAPTAETVIAA---------YQHA 60
Query: 86 LN----ERDYGHI-------AGMNKDDVCNKWGAEQVH 112
++ E+ Y K+ + K+ E H
Sbjct: 61 IDKLVAEKGYQSWDVISLRADNPQKEALREKFLNEHTH 98
>d3bofa2 c.1.26.1 (A:1-300) Cobalamin-dependent methionine
synthase MetH, N-terminal domain {Thermotoga maritima
[TaxId: 2336]}
Length = 300
Score = 24.2 bits (51), Expect = 8.4
Identities = 10/55 (18%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Query: 34 MSEANEIGKLLAKQGMVFDAAFSSSL-KRAQDTCQIILQEINQQHITPIYDDALN 87
M E+ KLL+++ ++ D A+ + K D L + ++ +
Sbjct: 1 MRNRREVSKLLSERVLLLDGAYGTEFMKYGYDDLPEELNIKAPDVVLKVHRSYIE 55
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.135 0.393
Gapped
Lambda K H
0.267 0.0427 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 767,248
Number of extensions: 34117
Number of successful extensions: 139
Number of sequences better than 10.0: 1
Number of HSP's gapped: 131
Number of HSP's successfully gapped: 28
Length of query: 212
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 131
Effective length of database: 1,295,466
Effective search space: 169706046
Effective search space used: 169706046
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.2 bits)