HHsearch alignment for GI: 254780279 and conserved domain: COG1810

>COG1810 Uncharacterized protein conserved in archaea [Function unknown].
Probab=96.06  E-value=0.066  Score=33.19  Aligned_cols=149  Identities=13%  Similarity=0.208  Sum_probs=87.9

Q ss_pred             CEEEEEECCCHHHHHHHHHHHHC-CCCEEEEEEECCCCHHHCCCHHHHCCCCCCCCCCCCCHHHHH---CCCCEEEEEE-
Q ss_conf             73799989987799999999838-997899999648980204553666087546754556857852---1355047631-
Q gi|254780279|r    5 PMRISVLGGGRMGQALIKEIHNN-PSITLHSIIVRSGSPLIGQDVGNFVGISPMGIKFSDNLAMAI---QSVDGIIDFS-   79 (280)
Q Consensus         5 ~IkV~I~GaGkMG~~ii~~i~~~-~~~eLv~~i~~~~~~~~g~d~~~~~~~~~~~v~i~~dl~~~~---~~~DViIDFT-   79 (280)
T Consensus         1 ~mki~vlt~g~yG~R~~~nl~~~~f~~~~v~v~~~P------e~~~~f----------ie~P~~~Lp~~~e~Di~va~~l   64 (224)
T COG1810           1 MMKILVLTDGEYGKRAVNNLACKGFKNQFVAVKEYP------EELPDF----------IEEPEDLLPKLPEADIVVAYGL   64 (224)
T ss_pred             CCEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEECC------CCCCCH----------HHCHHHHCCCCCCCCEEEEECC
T ss_conf             928999960620489987676521553158987366------325300----------1277976678888778999514


Q ss_pred             CCCHHHHHHHHHHHCCCEEEE-EECCCCHHHHHHHHHHHCCCC---------CEECCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             010247888764323721576-502223135899987403555---------2100001156899999999999861156
Q gi|254780279|r   80 SPALTLQSLNISAQHNIVHII-GTTGFSVKENEVISSFARNAP---------IVKSSNMSLGINFLGFLVETAAEYLLPA  149 (280)
Q Consensus        80 ~P~~~~~~~~~a~~~g~~vVi-GTTG~~~e~~~~l~~~s~~~~---------il~apN~SiGv~ll~~l~~~~a~~l~~~  149 (280)
T Consensus        65 HPDl~~~L~e~~~~~~~~alIvp~~-~~~g~rkqL~~~~~~~g~e~~~p~p~C~Le~~~---~p~i~~F~e~FG~-----  135 (224)
T COG1810          65 HPDLLLALPEKAAEGGVKALIVPAE-PPEGLRKQLKEFCEELGVEFEAPEPFCSLEPNE---NPHIDEFAERFGK-----  135 (224)
T ss_pred             CCCHHHHHHHHHHHCCCCEEEEECC-CCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCC---CHHHHHHHHHCCC-----
T ss_conf             8507899999998579617998457-973489999987422360553687655678888---8579999997199-----


Q ss_pred             CCCHHHH-----HHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf             6600899-----998641678998678999999998
Q gi|254780279|r  150 KDWDFEI-----LEMHHRRKLDSPSGTALLLGEAIA  180 (280)
Q Consensus       150 ~~~dieI-----~E~HH~~K~DaPSGTA~~la~~i~  180 (280)
T Consensus       136 P~vevev~~~~i~~V--~V~RsaPCGsT~~vAk~l~  169 (224)
T COG1810         136 PEVEVEVENGKIKDV--DVLRSAPCGSTWYVAKRLV  169 (224)
T ss_pred             CEEEEEECCCEEEEE--EEEECCCCCHHHHHHHHHC
T ss_conf             559999639918999--8873488720999999843