HHsearch alignment for GI: 254780279 and conserved domain: COG1893

Probab=94.54  E-value=0.24  Score=29.35  Aligned_cols=82  Identities=21%  Similarity=0.200  Sum_probs=42.0

Q ss_pred             EEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCC-HHH---CCCHHHHCCCCCCCCCCCCCHHHHHCCCCEEEEEECC
Q ss_conf             379998998779999999983899789999964898-020---4553666087546754556857852135504763101
Q gi|254780279|r    6 MRISVLGGGRMGQALIKEIHNNPSITLHSIIVRSGS-PLI---GQDVGNFVGISPMGIKFSDNLAMAIQSVDGIIDFSSP   81 (280)
Q Consensus         6 IkV~I~GaGkMG~~ii~~i~~~~~~eLv~~i~~~~~-~~~---g~d~~~~~~~~~~~v~i~~dl~~~~~~~DViIDFT~P   81 (280)
T Consensus         1 mkI~IlGaGAvG~l~g~~L~~~g--~~V~~~~R~~~~~~l~~~GL~i~~~~~-~~~~~~~~~~~~~~~~~~Dlviv~vKa   77 (307)
T COG1893           1 MKILILGAGAIGSLLGARLAKAG--HDVTLLVRSRRLEALKKKGLRIEDEGG-NFTTPVVAATDAEALGPADLVIVTVKA   77 (307)
T ss_pred             CEEEEECCCHHHHHHHHHHHHCC--CCEEEEECHHHHHHHHHCCEEEEECCC-CCCCCCCCCCCCCCCCCCCEEEEEECC
T ss_conf             95999878789999999998589--957998108999999878979981688-522443235673336788889998042


Q ss_pred             CHHHHHHHH
Q ss_conf             024788876
Q gi|254780279|r   82 ALTLQSLNI   90 (280)
Q Consensus        82 ~~~~~~~~~   90 (280)
T Consensus        78 ~q~~~al~~   86 (307)
T COG1893          78 YQLEEALPS   86 (307)
T ss_pred             CCHHHHHHH
T ss_conf             238999999