HHsearch alignment for GI: 254780279 and conserved domain: COG3804

Probab=98.49  E-value=9.9e-07  Score=66.24  Aligned_cols=114  Identities=19%  Similarity=0.305  Sum_probs=88.7

Q ss_pred             CEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHCCCHHHHCCCCCCCCCCCCCHHHHHC--CCCEEEEEECCC
Q ss_conf             737999899877999999998389978999996489802045536660875467545568578521--355047631010
Q gi|254780279|r    5 PMRISVLGGGRMGQALIKEIHNNPSITLHSIIVRSGSPLIGQDVGNFVGISPMGIKFSDNLAMAIQ--SVDGIIDFSSPA   82 (280)
Q Consensus         5 ~IkV~I~GaGkMG~~ii~~i~~~~~~eLv~~i~~~~~~~~g~d~~~~~~~~~~~v~i~~dl~~~~~--~~DViIDFT~P~   82 (280)
T Consensus         2 ~~~vvqyGtG~vGv~air~l~akpe~elvgawv~s~-ak~Gkdlgelagl~dlgV~a~~~~~avlAtl~~~~~y~~~~~~   80 (350)
T COG3804           2 SLRVVQYGTGSVGVAAIRGLLAKPELELVGAWVHSA-AKSGKDLGELAGLPDLGVIATNSIDAVLATLADAVIYAPLLPS   80 (350)
T ss_pred             CCEEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCC-CCCCCCHHHHCCCCCCEEEEECCCCCCEECCCCCEEEECCCCH
T ss_conf             730589625557799999997088971689995174-0013017876488885168652322200026663156102612


Q ss_pred             HHHHHHHHHHHCCCEEEE-EEC-----CCCHHHHHHHHHHHCCCC
Q ss_conf             247888764323721576-502-----223135899987403555
Q gi|254780279|r   83 LTLQSLNISAQHNIVHII-GTT-----GFSVKENEVISSFARNAP  121 (280)
Q Consensus        83 ~~~~~~~~a~~~g~~vVi-GTT-----G~~~e~~~~l~~~s~~~~  121 (280)
T Consensus        81 --~~~y~rlL~aGiNVv~~g~~l~yPw~~~PelaeKpl~lAaraG  123 (350)
T COG3804          81 --VDEYARLLRAGINVVTPGPVLQYPWFYPPELAEKPLELAARAG  123 (350)
T ss_pred             --HHHHHHHHHCCCCEECCCCCCCCCCCCCHHHHHCHHHHHHHCC
T ss_conf             --9999999975870661585334778679678655578998538