HHsearch alignment for GI: 254780279 and conserved domain: PRK03806
>PRK03806 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=93.66 E-value=0.57 Score=26.79 Aligned_cols=89 Identities=15% Similarity=0.122 Sum_probs=46.4
Q ss_pred CCCC-CEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHCCCHHHHCCCCCCCCCCCCCHHHHHCCCCEEEEEE
Q ss_conf 9988-737999899877999999998389978999996489802045536660875467545568578521355047631
Q gi|254780279|r 1 MHQS-PMRISVLGGGRMGQALIKEIHNNPSITLHSIIVRSGSPLIGQDVGNFVGISPMGIKFSDNLAMAIQSVDGIIDFS 79 (280)
Q Consensus 1 M~~~-~IkV~I~GaGkMG~~ii~~i~~~~~~eLv~~i~~~~~~~~g~d~~~~~~~~~~~v~i~~dl~~~~~~~DViIDFT 79 (280)
T Consensus 1 ~~d~~~k~v~V~GlG~sG~s~~~~L~~-~G~~v~~~-D~~~~~~~~~~l~~-----~~~~~~g~~~~~~~~~~d~vV--~ 71 (438)
T PRK03806 1 MADYQGKNVVIIGLGLTGLSCVDFFLA-RGVTPRVM-DTRMTPPGLDKLPE-----NVERHTGSLNDEWLLAADLIV--A 71 (438)
T ss_pred CCCCCCCEEEEEEECHHHHHHHHHHHH-CCCEEEEE-ECCCCCHHHHHHHC-----CCCEEECCCCHHHHCCCCEEE--E
T ss_conf 977789989999457888999999997-89969999-89999005788645-----884665777966806799999--8
Q ss_pred CCCHH--HHHHHHHHHCCCEE
Q ss_conf 01024--78887643237215
Q gi|254780279|r 80 SPALT--LQSLNISAQHNIVH 98 (280)
Q Consensus 80 ~P~~~--~~~~~~a~~~g~~v 98 (280)
T Consensus 72 SPGI~~~~p~~~~a~~~~i~i 92 (438)
T PRK03806 72 SPGIALAHPSLSAAADAGVEI 92 (438)
T ss_pred CCCCCCCCHHHHHHHHCCCCE
T ss_conf 997899898999999879947