HHsearch alignment for GI: 254780279 and conserved domain: PRK08644

Probab=96.38  E-value=0.011  Score=38.42  Aligned_cols=100  Identities=10%  Similarity=0.192  Sum_probs=58.2

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCC--------HHHCCCHHH----H----CC-CC-CC-----CCCC-C
Q ss_conf             79998998779999999983899789999964898--------020455366----6----08-75-46-----7545-5
Q gi|254780279|r    7 RISVLGGGRMGQALIKEIHNNPSITLHSIIVRSGS--------PLIGQDVGN----F----VG-IS-PM-----GIKF-S   62 (280)
Q Consensus         7 kV~I~GaGkMG~~ii~~i~~~~~~eLv~~i~~~~~--------~~~g~d~~~----~----~~-~~-~~-----~v~i-~   62 (280)
T Consensus        29 ~VlivG~GGLG~~~a~~La~a-GVG~i~lvD~D~Ve~SNL~RQ~~~~~diG~~Ka~~a~~~l~~iNp~v~I~~~~~~l~~  107 (209)
T PRK08644         29 KVGIAGAGGLGSNIAVALARS-GVGNLKLVDFDVVEPSNLNRQQYFISQIGMFKVEALKENLLRINPFVKIEVHQVKIDE  107 (209)
T ss_pred             CEEEECCCHHHHHHHHHHHHH-CCCEEEEEECCEECCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCEEEEEEECCCCH
T ss_conf             689988878899999999993-8981899889990154110375678775975699999998744898289997224898


Q ss_pred             CCHHHHHCCCCEEEEEE-CCCHHHHHHHHHHH-CCCEEEEEE--CCCCH
Q ss_conf             68578521355047631-01024788876432-372157650--22231
Q gi|254780279|r   63 DNLAMAIQSVDGIIDFS-SPALTLQSLNISAQ-HNIVHIIGT--TGFSV  107 (280)
Q Consensus        63 ~dl~~~~~~~DViIDFT-~P~~~~~~~~~a~~-~g~~vViGT--TG~~~  107 (280)
T Consensus       108 ~n~~~l~~~~DiViDctDN~~tR~li~~~c~~~~~~plV~as~i~g~g~  156 (209)
T PRK08644        108 DNIEELFKDCDIVVEAFDNAETKAMLVETVLEKKGKKVVSASGMAGYGD  156 (209)
T ss_pred             HHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECC
T ss_conf             9999998579999999999999999999999977996899961215757