HHsearch alignment for GI: 254780279 and conserved domain: PRK09496
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed.
Probab=96.90 E-value=0.0067 Score=40.02 Aligned_cols=126 Identities=15% Similarity=0.210 Sum_probs=61.4
Q ss_pred EEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHCCCHHHHCCCCC-CC-CCCCCCHHHH-HCCCCEEEEEECCC
Q ss_conf 379998998779999999983899789999964898020455366608754-67-5455685785-21355047631010
Q gi|254780279|r 6 MRISVLGGGRMGQALIKEIHNNPSITLHSIIVRSGSPLIGQDVGNFVGISP-MG-IKFSDNLAMA-IQSVDGIIDFSSPA 82 (280)
Q Consensus 6 IkV~I~GaGkMG~~ii~~i~~~~~~eLv~~i~~~~~~~~g~d~~~~~~~~~-~~-v~i~~dl~~~-~~~~DViIDFT~P~ 82 (280)
T Consensus 1 M~IiI~GaG~vG~~La~~Ls~-e~~dV~-vID~d~~~~--~~~~~~lDv~~i~Gd~~~~~~L~~Agi~~ad~~IAvT~~D 76 (455)
T PRK09496 1 MKIIILGAGQVGGTLAERLVG-ENNDVT-VIDTDEERL--RRLQDRLDVRTVVGNGSHPDVLREAGAEDADMLIAVTDSD 76 (455)
T ss_pred CEEEEECCCHHHHHHHHHHHH-CCCCEE-EEECCHHHH--HHHHHHCCEEEEEECCCCHHHHHHCCCCCCCEEEEECCCH
T ss_conf 979999988899999999986-899799-998999999--9988625868999668999999965998699999957971
Q ss_pred HHHH-HHHHHHH-CCCEEEEEECCCCHHHHHHHHHH--HC--CCCCEECCCHHHHHHHHH
Q ss_conf 2478-8876432-37215765022231358999874--03--555210000115689999
Q gi|254780279|r 83 LTLQ-SLNISAQ-HNIVHIIGTTGFSVKENEVISSF--AR--NAPIVKSSNMSLGINFLG 136 (280)
Q Consensus 83 ~~~~-~~~~a~~-~g~~vViGTTG~~~e~~~~l~~~--s~--~~~il~apN~SiGv~ll~ 136 (280)
T Consensus 77 e~Nli~~~lAk~l~g~~~tIaRv~-n~ey~~~~~~~~~~~~lgid~iI~Pe~~~a~~I~~ 135 (455)
T PRK09496 77 ETNMVACQIAKSLFGTPTKIARIR-NPEYLREYPKLFNKEALGIDVLISPELLVAREIAR 135 (455)
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEC-CHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHH
T ss_conf 899999999998669982499974-77764304442001147864898782999999999