HHsearch alignment for GI: 254780279 and conserved domain: TIGR02356
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF; InterPro: IPR012731 Members of the HesA/MoeB/ThiF family of proteins (IPR000594 from INTERPRO) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees. The Escherichia coli ThiF and MoeB proteins are seemingly more closely related than the E. coli ThiF and Campylobacter (for example) ThiF. This entry represents the more widely distributed clade of ThiF proteins as found in E. coli..
Probab=96.37 E-value=0.014 Score=37.90 Aligned_cols=99 Identities=20% Similarity=0.299 Sum_probs=63.8
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCHH---------HCCCHH------HH----CCCCCCCCCC------
Q ss_conf 7999899877999999998389978999996489802---------045536------66----0875467545------
Q gi|254780279|r 7 RISVLGGGRMGQALIKEIHNNPSITLHSIIVRSGSPL---------IGQDVG------NF----VGISPMGIKF------ 61 (280)
Q Consensus 7 kV~I~GaGkMG~~ii~~i~~~~~~eLv~~i~~~~~~~---------~g~d~~------~~----~~~~~~~v~i------ 61 (280)
T Consensus 23 ~VLiiGaGgLGs~~~~~LA~-AGVG~i~i~D~D~V~~SNLqRQ~Lf~e~Dv~~~~pK~e~aa~~l~~LN~~i~v~a~~~~ 101 (210)
T TIGR02356 23 HVLIIGAGGLGSPAALYLAA-AGVGTITIVDDDHVDLSNLQRQILFAEEDVGTLRPKVEAAAERLRELNSDIRVTALKER 101 (210)
T ss_pred CEEEEEECHHHHHHHHHHHH-CCCCEEEEEECCEECHHHCHHHHHHCHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEEC
T ss_conf 65999726145689999982-88837899851677010120554303244201315899999999853889689985420
Q ss_pred --CCCHHHHHCCCC--EEEEEE-CCCHHHHHHHHHHHCCCEEEEEE-CCCC
Q ss_conf --568578521355--047631-01024788876432372157650-2223
Q gi|254780279|r 62 --SDNLAMAIQSVD--GIIDFS-SPALTLQSLNISAQHNIVHIIGT-TGFS 106 (280)
Q Consensus 62 --~~dl~~~~~~~D--ViIDFT-~P~~~~~~~~~a~~~g~~vViGT-TG~~ 106 (280)
T Consensus 102 vt~~~~~~~i~~~DPdlVlDc~DNf~tryliNdaC~~~~~PlI~aavvG~~ 152 (210)
T TIGR02356 102 VTAENLELLIENVDPDLVLDCTDNFATRYLINDACQALGIPLISAAVVGFE 152 (210)
T ss_pred CCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEEEC
T ss_conf 277999999623899689615668778899999999847986999887635