HHsearch alignment for GI: 254780279 and conserved domain: TIGR02717
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain; InterPro: IPR014089 This group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which they have been characterised , , . In most species this protein is bifunctional, existing as fused alpha-beta domains. In Pyrococcus and related species, however, the domains exist as separate polypeptides. This entry represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. One of these (along with its beta-domain partner) was characterised as ACS-II showing specificity for phenylacetyl-CoA . This entry excludes non-ACS-I paralogs. .
Probab=97.28 E-value=0.0015 Score=44.46 Aligned_cols=132 Identities=19% Similarity=0.187 Sum_probs=90.1
Q ss_pred CCEEEEEECC----CHHHHHHHHHHHHCCCCEEEEEEECCCCHHHCCCHHHHCCCCCCC-CCCCCCHHHH-HCCCCEEEE
Q ss_conf 8737999899----877999999998389978999996489802045536660875467-5455685785-213550476
Q gi|254780279|r 4 SPMRISVLGG----GRMGQALIKEIHNNPSITLHSIIVRSGSPLIGQDVGNFVGISPMG-IKFSDNLAMA-IQSVDGIID 77 (280)
Q Consensus 4 ~~IkV~I~Ga----GkMG~~ii~~i~~~~~~eLv~~i~~~~~~~~g~d~~~~~~~~~~~-v~i~~dl~~~-~~~~DViID 77 (280)
T Consensus 6 ~P~SvAVIGAS~~~gKVGy~i~~NL~~~Gy~G~~YPVNpk~~------------i~i~Gr~k~Y~~~~~~dP~~VDLAVi 73 (457)
T TIGR02717 6 NPKSVAVIGASRDEGKVGYAIMKNLIEGGYKGKIYPVNPKAG------------IEILGRVKAYPSVLEIDPDEVDLAVI 73 (457)
T ss_pred CCCCEEEECCCCCCCCCCHHHHEEEECCCCEEEEEEECCCCC------------EEEEECCCCCCCHHHCCCCCCCEEEE
T ss_conf 887158971248898510022000003783036876227887------------14630114578711148997347999
Q ss_pred EECCCHHHHHHHHHHHCCCE-EEEEECCCCH------HHHHHHHHHHCCCCC-EECCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf 31010247888764323721-5765022231------358999874035552-1000011568999999999998611
Q gi|254780279|r 78 FSSPALTLQSLNISAQHNIV-HIIGTTGFSV------KENEVISSFARNAPI-VKSSNMSLGINFLGFLVETAAEYLL 147 (280)
Q Consensus 78 FT~P~~~~~~~~~a~~~g~~-vViGTTG~~~------e~~~~l~~~s~~~~i-l~apN~SiGv~ll~~l~~~~a~~l~ 147 (280)
T Consensus 74 vvPa~~vp~v~eECG~KGVkg~vvI~AGF~E~G~eG~~LE~~l~~~a~kYg~Rl~GPNclG~~nt~~~lNAtFA~~~p 151 (457)
T TIGR02717 74 VVPAKLVPQVVEECGEKGVKGAVVITAGFKEVGEEGAELEQKLVEIARKYGMRLLGPNCLGIINTEIKLNATFAPTMP 151 (457)
T ss_pred ECCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCCHHHHHCCCCCCC
T ss_conf 728567999999986179518999714864531678999999999997678817767362258144021100135788