HHsearch alignment for GI: 254780279 and conserved domain: cd01487
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.46 E-value=0.011 Score=38.49 Aligned_cols=95 Identities=13% Similarity=0.177 Sum_probs=55.9
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCC--------HHHCCCHHH----H-----------CCCCCCCCCC-C
Q ss_conf 79998998779999999983899789999964898--------020455366----6-----------0875467545-5
Q gi|254780279|r 7 RISVLGGGRMGQALIKEIHNNPSITLHSIIVRSGS--------PLIGQDVGN----F-----------VGISPMGIKF-S 62 (280)
Q Consensus 7 kV~I~GaGkMG~~ii~~i~~~~~~eLv~~i~~~~~--------~~~g~d~~~----~-----------~~~~~~~v~i-~ 62 (280)
T Consensus 1 kV~IvG~GGLG~~~a~~La~a-Gvg~i~lvD~D~Ve~SNL~RQ~~~~~diG~~Ka~~a~~~l~~iNp~i~i~~~~~~l~~ 79 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARS-GVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE 79 (174)
T ss_pred CEEEECCCHHHHHHHHHHHHH-CCCEEEEEECCCCCCCCHHCCHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCH
T ss_conf 989987678899999999981-8973999989946664430132477747974999999999987979889999144499
Q ss_pred CCHHHHHCCCCEEEEEE-CCCHHHHHHHHHHH-CCCEEEEEE
Q ss_conf 68578521355047631-01024788876432-372157650
Q gi|254780279|r 63 DNLAMAIQSVDGIIDFS-SPALTLQSLNISAQ-HNIVHIIGT 102 (280)
Q Consensus 63 ~dl~~~~~~~DViIDFT-~P~~~~~~~~~a~~-~g~~vViGT 102 (280)
T Consensus 80 ~n~~~l~~~~D~ViD~~Dn~~tr~~l~~~~~~~~~~plv~as 121 (174)
T cd01487 80 NNLEGLFGDCDIVVEAFDNAETKAMLAESLLGNKNKPVVCAS 121 (174)
T ss_pred HHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 999999837999999999989999999999998799599997