HHsearch alignment for GI: 254780279 and conserved domain: cd05291
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=97.19 E-value=0.0023 Score=43.19 Aligned_cols=126 Identities=13% Similarity=0.198 Sum_probs=69.2
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHC--CCHHHHCCCCCCCCCCCCCHHHHHCCCCEEEEE-ECCCH
Q ss_conf 799989987799999999838997899999648980204--553666087546754556857852135504763-10102
Q gi|254780279|r 7 RISVLGGGRMGQALIKEIHNNPSITLHSIIVRSGSPLIG--QDVGNFVGISPMGIKFSDNLAMAIQSVDGIIDF-SSPAL 83 (280)
Q Consensus 7 kV~I~GaGkMG~~ii~~i~~~~~~eLv~~i~~~~~~~~g--~d~~~~~~~~~~~v~i~~dl~~~~~~~DViIDF-T~P~~ 83 (280)
T Consensus 2 KI~IIGaG~VG~~~a~~l~~~~l~~el~L~Di~~~~a~G~a~DL~~~~~~~~~~~~i~~~~~~~~~~aDvvVitAG~~rk 81 (306)
T cd05291 2 KVVIIGAGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYSDCKDADIVVITAGAPQK 81 (306)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCEEEECCCCCCC
T ss_conf 59999969889999999985799877999818987017699988701330599739960887884789999990676679
Q ss_pred -HHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHH
Q ss_conf -478887643237215765022231358999874035552100001156899999999999
Q gi|254780279|r 84 -TLQSLNISAQHNIVHIIGTTGFSVKENEVISSFARNAPIVKSSNMSLGINFLGFLVETAA 143 (280)
Q Consensus 84 -~~~~~~~a~~~g~~vViGTTG~~~e~~~~l~~~s~~~~il~apN~SiGv~ll~~l~~~~a 143 (280)
T Consensus 82 ~g~~R~dL-l~~N~~I~-------k~i~~~i~~~~p~aivivvtNP---vDvmt~~~~k~s 131 (306)
T cd05291 82 PGETRLDL-LEKNAKIM-------KSIVPKIKASGFDGIFLVASNP---VDVITYVVQKLS 131 (306)
T ss_pred CCCCHHHH-HHHHHHHH-------HHHHHHHHHCCCCCEEEEECCC---HHHHHHHHHHHC
T ss_conf 99987899-99789999-------9999998722997189993581---678999999850