HHsearch alignment for GI: 254780279 and conserved domain: cd05294
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=96.16 E-value=0.029 Score=35.68 Aligned_cols=70 Identities=27% Similarity=0.447 Sum_probs=40.8
Q ss_pred EEEEEECC-CHHHHHHHHHHHHCCCCEEEEEEECCCC--HHHCC--CHHHHCCCCCC--CCCCCCCHHHHHCCCCEEE
Q ss_conf 37999899-8779999999983899789999964898--02045--53666087546--7545568578521355047
Q gi|254780279|r 6 MRISVLGG-GRMGQALIKEIHNNPSITLHSIIVRSGS--PLIGQ--DVGNFVGISPM--GIKFSDNLAMAIQSVDGII 76 (280)
Q Consensus 6 IkV~I~Ga-GkMG~~ii~~i~~~~~~eLv~~i~~~~~--~~~g~--d~~~~~~~~~~--~v~i~~dl~~~~~~~DViI 76 (280)
T Consensus 1 mKV~IiGAaG~VG~~~a~~l~~~~~~~el~LiD~~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~d~~-~~~daDivV 77 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDLS-DVAGSDIVI 77 (309)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEHHHHCCCCCCCCCCEEEECCCHH-HHCCCCEEE
T ss_conf 98999999976999999999837998759996055643423112355450343368876798279889-968999999