HHsearch alignment for GI: 254780279 and conserved domain: cd05313
>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t
Probab=93.63 E-value=0.65 Score=26.38 Aligned_cols=119 Identities=10% Similarity=0.059 Sum_probs=68.7
Q ss_pred CEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCHH--HCCCHHH---HCCCC-------------CCCCCCCCCHH
Q ss_conf 737999899877999999998389978999996489802--0455366---60875-------------46754556857
Q gi|254780279|r 5 PMRISVLGGGRMGQALIKEIHNNPSITLHSIIVRSGSPL--IGQDVGN---FVGIS-------------PMGIKFSDNLA 66 (280)
Q Consensus 5 ~IkV~I~GaGkMG~~ii~~i~~~~~~eLv~~i~~~~~~~--~g~d~~~---~~~~~-------------~~~v~i~~dl~ 66 (280)
T Consensus 38 g~~vaIQGfGnVG~~aA~~l~e-~GakvVaVsD~~G~i~~~~Gld~~~l~~l~~~k~~~~~~~~~~~~~~~~~~~~~~~~ 116 (254)
T cd05313 38 GKRVAISGSGNVAQYAAEKLLE-LGAKVVTLSDSKGYVYDPDGFTGEKLAELKEIKEVRRGRVSEYAKKYGTAKYFEGKK 116 (254)
T ss_pred CCEEEEECCCHHHHHHHHHHHH-CCCEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCEECCCCC
T ss_conf 9999998977999999999997-799799998578508879999889999999999746871024441389856638975
Q ss_pred HHHCCCCEEEEEECCCHH-HHHHHHHHHCCCEEEE-EECCCC-HHHHHHHHHHHCCCCCEECCCH
Q ss_conf 852135504763101024-7888764323721576-502223-1358999874035552100001
Q gi|254780279|r 67 MAIQSVDGIIDFSSPALT-LQSLNISAQHNIVHII-GTTGFS-VKENEVISSFARNAPIVKSSNM 128 (280)
Q Consensus 67 ~~~~~~DViIDFT~P~~~-~~~~~~a~~~g~~vVi-GTTG~~-~e~~~~l~~~s~~~~il~apN~ 128 (280)
T Consensus 117 ~~~~~cDIliPaA~en~I~~~nA~~i~a~~ck~IvEgANgP~T~eAd~iL~~--k--GI~viPDi 177 (254)
T cd05313 117 PWEVPCDIAFPCATQNEVDAEDAKLLVKNGCKYVAEGANMPCTAEAIEVFRQ--A--GVLFAPGK 177 (254)
T ss_pred HHHCCCCEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHH--C--CCEEECHH
T ss_conf 1330476997435466789999999996798299865889998789999998--8--98896805