HHsearch alignment for GI: 254780279 and conserved domain: cd05313

>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t
Probab=93.63  E-value=0.65  Score=26.38  Aligned_cols=119  Identities=10%  Similarity=0.059  Sum_probs=68.7

Q ss_pred             CEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCHH--HCCCHHH---HCCCC-------------CCCCCCCCCHH
Q ss_conf             737999899877999999998389978999996489802--0455366---60875-------------46754556857
Q gi|254780279|r    5 PMRISVLGGGRMGQALIKEIHNNPSITLHSIIVRSGSPL--IGQDVGN---FVGIS-------------PMGIKFSDNLA   66 (280)
Q Consensus         5 ~IkV~I~GaGkMG~~ii~~i~~~~~~eLv~~i~~~~~~~--~g~d~~~---~~~~~-------------~~~v~i~~dl~   66 (280)
T Consensus        38 g~~vaIQGfGnVG~~aA~~l~e-~GakvVaVsD~~G~i~~~~Gld~~~l~~l~~~k~~~~~~~~~~~~~~~~~~~~~~~~  116 (254)
T cd05313          38 GKRVAISGSGNVAQYAAEKLLE-LGAKVVTLSDSKGYVYDPDGFTGEKLAELKEIKEVRRGRVSEYAKKYGTAKYFEGKK  116 (254)
T ss_pred             CCEEEEECCCHHHHHHHHHHHH-CCCEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCEECCCCC
T ss_conf             9999998977999999999997-799799998578508879999889999999999746871024441389856638975


Q ss_pred             HHHCCCCEEEEEECCCHH-HHHHHHHHHCCCEEEE-EECCCC-HHHHHHHHHHHCCCCCEECCCH
Q ss_conf             852135504763101024-7888764323721576-502223-1358999874035552100001
Q gi|254780279|r   67 MAIQSVDGIIDFSSPALT-LQSLNISAQHNIVHII-GTTGFS-VKENEVISSFARNAPIVKSSNM  128 (280)
Q Consensus        67 ~~~~~~DViIDFT~P~~~-~~~~~~a~~~g~~vVi-GTTG~~-~e~~~~l~~~s~~~~il~apN~  128 (280)
T Consensus       117 ~~~~~cDIliPaA~en~I~~~nA~~i~a~~ck~IvEgANgP~T~eAd~iL~~--k--GI~viPDi  177 (254)
T cd05313         117 PWEVPCDIAFPCATQNEVDAEDAKLLVKNGCKYVAEGANMPCTAEAIEVFRQ--A--GVLFAPGK  177 (254)
T ss_pred             HHHCCCCEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHH--C--CCEEECHH
T ss_conf             1330476997435466789999999996798299865889998789999998--8--98896805