HHsearch alignment for GI: 254780279 and conserved domain: pfam02423
>pfam02423 OCD_Mu_crystall Ornithine cyclodeaminase/mu-crystallin family. This family contains the bacterial Ornithine cyclodeaminase enzyme EC:4.3.1.12, which catalyses the deamination of ornithine to proline. This family also contains mu-Crystallin the major component of the eye lens in several Australian marsupials, mRNA for this protein has also been found in human retina.
Probab=96.27 E-value=0.017 Score=37.23 Aligned_cols=101 Identities=11% Similarity=0.076 Sum_probs=66.9
Q ss_pred EEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHCCCHHHHCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCHHH
Q ss_conf 37999899877999999998389978999996489802045536660875467545568578521355047631010247
Q gi|254780279|r 6 MRISVLGGGRMGQALIKEIHNNPSITLHSIIVRSGSPLIGQDVGNFVGISPMGIKFSDNLAMAIQSVDGIIDFSSPALTL 85 (280)
Q Consensus 6 IkV~I~GaGkMG~~ii~~i~~~~~~eLv~~i~~~~~~~~g~d~~~~~~~~~~~v~i~~dl~~~~~~~DViIDFT~P~~~~ 85 (280)
T Consensus 130 ~~l~iiGaG~QA~~~l~al~~v~~i~~v~v~~r~~~~~--~~f~~~~~~~~~~v~~~~~~~~av~~ADIIvtaT~s~~~- 206 (312)
T pfam02423 130 STLAIIGAGAQAEFQAEALSAVLPIEEIRIYDRDPEAA--EKFARNLQGKGFEIVACTSAEEAVEGADIVVTVTPDKEF- 206 (312)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCHHHH--HHHHHHHHHCCCCEEEECCHHHHHHCCCEEEEEECCCCC-
T ss_conf 57999646253899999999619976899996898999--999999983499659948999997149989997359977-
Q ss_pred HHH-HHHHHCCCEEE-EEECCCCHHH
Q ss_conf 888-76432372157-6502223135
Q gi|254780279|r 86 QSL-NISAQHNIVHI-IGTTGFSVKE 109 (280)
Q Consensus 86 ~~~-~~a~~~g~~vV-iGTTG~~~e~ 109 (280)
T Consensus 207 P~~~~~~l~~G~hv~~vGs~~p~~~E 232 (312)
T pfam02423 207 PILKAEWVKPGVHINAVGADCPGKTE 232 (312)
T ss_pred CCCCHHHCCCCCEEEEECCCCCCCCC
T ss_conf 50077883898689972699997043