HHsearch alignment for GI: 254780279 and conserved domain: pfam05368
>pfam05368 NmrA NmrA-like family. NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.
Probab=95.81 E-value=0.048 Score=34.16 Aligned_cols=91 Identities=15% Similarity=0.257 Sum_probs=49.8
Q ss_pred EEEECC-CHHHHHHHHHHHHCCCCEEEEEEECCCCHHHCCCHHHHCCCCC--CCCCCCCCHHHHHCCCCEEEEEECCC--
Q ss_conf 999899-8779999999983899789999964898020455366608754--67545568578521355047631010--
Q gi|254780279|r 8 ISVLGG-GRMGQALIKEIHNNPSITLHSIIVRSGSPLIGQDVGNFVGISP--MGIKFSDNLAMAIQSVDGIIDFSSPA-- 82 (280)
Q Consensus 8 V~I~Ga-GkMG~~ii~~i~~~~~~eLv~~i~~~~~~~~g~d~~~~~~~~~--~~v~i~~dl~~~~~~~DViIDFT~P~-- 82 (280)
T Consensus 1 IlV~GatG~iG~~vv~~L~~-~g~~Vr~-l~R~~~~~~~~~l~~-~gve~v~gD~~d~~sl~~al~gvd~v~~~~~~~~~ 77 (232)
T pfam05368 1 ILVFGATGYQGGSVVRASLK-AGHPVRA-LVRDPKSELAKSLKA-AGVELVEGDLDDHESLVEALKGVDVVFSVTGFWLS 77 (232)
T ss_pred EEEECCCHHHHHHHHHHHHH-CCCCEEE-EECCCCHHHHHHHHH-CCCEEEEECCCCHHHHHHHHCCCCEEEEECCCCCC
T ss_conf 09989682899999999985-8993899-971873665666641-79889990688878999996799889991588741
Q ss_pred ----HHHHHHHHHHHCCCEEEEE
Q ss_conf ----2478887643237215765
Q gi|254780279|r 83 ----LTLQSLNISAQHNIVHIIG 101 (280)
Q Consensus 83 ----~~~~~~~~a~~~g~~vViG 101 (280)
T Consensus 78 ~~~~~~~~~~~AA~~aGVk~~V~ 100 (232)
T pfam05368 78 KEIEDGKKLADAAKEAGVKHFIP 100 (232)
T ss_pred HHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 77999999999999739983455