HHsearch alignment for GI: 254780280 and conserved domain: PRK09604
>PRK09604 putative DNA-binding/iron metalloprotein/AP endonuclease; Reviewed.
Probab=95.72 E-value=0.13 Score=28.02 Aligned_cols=94 Identities=16% Similarity=0.152 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEE----ECCCC
Q ss_conf 79999999999999999999997489973899656776556772764899998837983788973887999----57872
Q gi|254780280|r 243 IALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVI----TNPYI 318 (348)
Q Consensus 243 ~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~----~~~~a 318 (348)
T Consensus 234 iaasfQ~~i~~~L~~k~~~A~~~~~~k~-lvv~GGVaaN--~~L-----R~~l~~---~~~-~~~~~~~~P~~~~ctDNA 301 (335)
T PRK09604 234 IAASFQEAVVDVLVEKTKRALKKTGVKT-LVVAGGVAAN--SYL-----REKLAE---LCK-KRGIEVYIPPLELCTDNG 301 (335)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCE-EEEECCHHHH--HHH-----HHHHHH---HHH-HCCCEEEECCHHHCCHHH
T ss_conf 9999999999999999999999979987-9994647777--999-----999999---999-749989808979751479
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 277599987380012444575311001379
Q gi|254780280|r 319 AIAGMVSYIKMTDCFNLFISEGIKRRWFKD 348 (348)
Q Consensus 319 gl~GAa~~~r~~~~~~~~~~~~~~~~~~~~ 348 (348)
T Consensus 302 aMIA~ag~~~~~~g~~~~l~~~~~prw~ld 331 (335)
T PRK09604 302 AMIAYAGAERYKKGPFSPLDLNVRPRWPLD 331 (335)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 999999999997599999976223799721