HHsearch alignment for GI: 254780280 and conserved domain: TIGR02628
>TIGR02628 fuculo_kin_coli L-fuculokinase; InterPro: IPR013450 Proteins in this entry are L-fuculokinases from the clade that includes the Escherichia coli enzyme P11553 from SWISSPROT. They catalyze the second step in fucose catabolism and belong to the FGGY family of carbohydrate kinases. These enzymes are encoded by the kinase (K) gene of the fucose (fuc) operon.; GO: 0008737 L-fuculokinase activity, 0005975 carbohydrate metabolic process.
Probab=95.00 E-value=0.11 Score=28.60 Aligned_cols=80 Identities=20% Similarity=0.194 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH--HHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEEECCCCH
Q ss_conf 57999999999999999999999--7489973899656776556772764899998837983788973887999578722
Q gi|254780280|r 242 PIALKAINLFCEYLGRVAGDLAL--IFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVITNPYIA 319 (348)
Q Consensus 242 ~~A~~~~~~~~~~lg~~i~~l~~--~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~~~~~ag 319 (348)
T Consensus 374 ~iyraalegl~~qLk~~l~~L~~~~qf~a~~l~~VGGGskN~----LWN-Qir---------An~L-~~p~~vvd~aE~T 438 (473)
T TIGR02628 374 EIYRAALEGLAKQLKRRLDVLEQVSQFKAKELVVVGGGSKNV----LWN-QIR---------ANAL-DLPVKVVDDAEAT 438 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCH----HHH-HHH---------HHHH-CCCHHHHHHHHHH
T ss_conf 899999999999987423578776311377568961785211----467-866---------7665-0870001200257
Q ss_pred HHHHHHHHHCCCCCCCC
Q ss_conf 77599987380012444
Q gi|254780280|r 320 IAGMVSYIKMTDCFNLF 336 (348)
Q Consensus 320 l~GAa~~~r~~~~~~~~ 336 (348)
T Consensus 439 V~GAAmF~f~GvG~y~~ 455 (473)
T TIGR02628 439 VLGAAMFAFAGVGIYED 455 (473)
T ss_pred HHHHHHHHCCCCCCCCC
T ss_conf 89999976224644389