HHsearch alignment for GI: 254780280 and conserved domain: TIGR03123
>TIGR03123 one_C_unchar_1 probable H4MPT-linked C1 transfer pathway protein. This protein family was identified, by the method of partial phylogenetic profiling, as related to the use of tetrahydromethanopterin (H4MPT) as a C-1 carrier. Characteristic markers of the H4MPT-linked C1 transfer pathway include formylmethanofuran dehydrogenase subunits, methenyltetrahydromethanopterin cyclohydrolase, etc. Tetrahydromethanopterin, a tetrahydrofolate analog, occurs in methanogenic archaea, bacterial methanotrophs, planctomycetes, and a few other lineages.
Probab=95.50 E-value=0.054 Score=30.41 Aligned_cols=58 Identities=19% Similarity=0.233 Sum_probs=38.1
Q ss_pred EEEEECCCCEEEEEEECCCCEEEEEEEECCC---CCCCHHHHHHHHHHHCCCCCCCEEEEEEEE
Q ss_conf 9998575118999987799808899974388---735889999999972234565546999730
Q gi|254780280|r 16 LLADIGGTNVRFAILRSMESEPEFCCTVQTS---DYENLEHAIQEVIYRKISIRLRSAFLAIAT 76 (348)
Q Consensus 16 L~iDIGGT~ir~glv~~~~~~i~~~~~~~t~---~~~~~~~~i~~~l~~~~~~~~~~igi~v~G 76 (348)
T Consensus 1 iG~DIGGAnlK~a~~~~-~g~i~~~~~~~~plWk~~~~L~~~l~~i~~~~~~--~~~~avTMTg 61 (318)
T TIGR03123 1 LGIDIGGANTKAAELDE-DGRIKEVHQLYCPLWKGNDKLAETLKEISQDLSS--ADNVAVTMTG 61 (318)
T ss_pred CCEEECCCEEEEEEECC-CCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCC--CCEEEEEEEH
T ss_conf 91552550147888538-9868899985170217836789999999985583--1318999206