HHsearch results for GI: 254780280 and protein with PDBid: 2ap1_A
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=100.00 E-value=3.7e-34 Score=227.75 Aligned_cols=291 Identities=19% Similarity=0.127 Sum_probs=199.0
Q ss_pred CCCCCEEEEEECCCCEEEEEEECCCCEEEEEEEECCC--CCCCHHHHHHHHHHHC--CCCCCCEEEEEEEEEEECCCEEE
Q ss_conf 6677379998575118999987799808899974388--7358899999999722--34565546999730441685564
Q gi|254780280|r 10 PIAFPVLLADIGGTNVRFAILRSMESEPEFCCTVQTS--DYENLEHAIQEVIYRK--ISIRLRSAFLAIATPIGDQKSFT 85 (348)
Q Consensus 10 ~~~~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~--~~~~~~~~i~~~l~~~--~~~~~~~igi~v~Gpv~~~~~~~ 85 (348)
|.+|= |+|||||||||++++|.. +++..+.+.||. +++.+.+.+.+.+++. .......+||++||+++......
T Consensus 22 ~~~~y-lGiDiGGT~i~~al~d~~-G~il~~~~~~t~~~~~~~~l~~i~~~i~~~~~~~~~~~~igi~~~G~vd~~~g~i 99 (327)
T 2ap1_A 22 SNAMY-YGFDIGGTKIALGVFDST-RRLQWEKRVPTPHTSYSAFLDAVCELVEEADQRFGVKGSVGIGIPGMPETEDGTL 99 (327)
T ss_dssp -CCEE-EEEEECSSEEEEEEEETT-CCEEEEEEEECCCSCHHHHHHHHHHHHHHHHHHHTSCCEEEEEESSBSCCTTSCC
T ss_pred CCCEE-EEEEECCCEEEEEEECCC-CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEE
T ss_conf 89579-999967224999999199-9899999986999999999999999999998863887289999788654678648
Q ss_pred --ECCCCCCC-CH-HHHHHHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEEC
Q ss_conf --21356666-98-899998289855882126543200001586553530243455766675279931762022454310
Q gi|254780280|r 86 --LTNYHWVI-DP-EELISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIR 161 (348)
Q Consensus 86 --~~~~~~~~-~~-~~l~~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~ 161 (348)
.+...|.. +. .+|.+.++. ||.++||.++.+++|.+++. ......++++..|+|+|.+.+.+
T Consensus 100 ~~~~~~~~~~~~l~~~L~~~~~~-~v~~~nD~~~~Al~e~~~g~-------------~~~~~~~~~~~ig~gig~g~~~~ 165 (327)
T 2ap1_A 100 YAANVPAASGKPLRADLSARLDR-DVRLDNDANCFALSEAWDDE-------------FTQYPLVMGLILGTGVGGGLVLN 165 (327)
T ss_dssp BCTTCTTTTTSCHHHHHHHHHTS-CEEEEEHHHHHHHHHHTSTT-------------GGGCSEEEEEEESSSEEEEEEET
T ss_pred ECCCCCCCCCCHHHHHHHHHHCC-CEEEECCCHHHHHHHHHCCC-------------CCCCCEEEEEEECCCCCCEEEEC
T ss_conf 34667332466099999998799-87982475187888876177-------------65235189999646422137745
Q ss_pred CC--CCCEECCCCCCCCCCCCCCHHHHHH-HHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 58--8630113567866667661023478-99998531898648775222238999999987408886436988899883
Q gi|254780280|r 162 AK--DSWIPISCEGGHMDIGPSTQRDYEI-FPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIVSK 238 (348)
Q Consensus 162 ~~--~g~~~~agE~Gh~~~~~~~~~~~~~-~~~l~~~~g~~~~~E~~~SG~gl~~~y~~l~~~~~~~~~~~~~~~~~~~~ 238 (348)
+. .|.+..++|+||+.+.+........ .....|.|+..+|+|.++|...+.+.+..... ..........+++
T Consensus 166 g~~~~G~~g~ageig~~~v~~~g~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i~~~~~ 240 (327)
T 2ap1_A 166 GKPITGQSYITGEFGHMRLPVDALTLMGFDFPLRRCGCGQMGCIENYLSGRGFAWLYQHYYD-----QSLQAPEIIALWE 240 (327)
T ss_dssp TEEECCTTSCTTCGGGSBCCHHHHHHHCTTSCCCBCTTSCBSBTHHHHSHHHHHHHHHHHHC-----CCCCHHHHHHHHH
T ss_pred CCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCC-----CCCCHHHHHHHHH
T ss_conf 74355887626465578866887444466666543345566751432135899999875225-----5443244445776
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCH--HHHHHHCCEEEE-EC
Q ss_conf 689579999999999999999999997489973899656776556772764899998837983--788973887999-57
Q gi|254780280|r 239 SEDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPH--KELMRQIPTYVI-TN 315 (348)
Q Consensus 239 ~~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~--~~~l~~ipv~~~-~~ 315 (348)
.+|+.|.+.+++++++|+.+++|++++|+|+. |||||+++.. .+++ +...++.+. .+....++|..+ ++
T Consensus 241 ~gd~~a~~~i~~~~~~l~~~ianl~~l~dP~~-IvlGG~v~~~-~~~~------~~i~~~~~~~~~~~~~~~~I~~a~lg 312 (327)
T 2ap1_A 241 QGDEQAHAHVERYLDLLAVCLGNILTIVDPDL-LVIGGGLSNF-TAIT------TQLAERLPRHLLPVARAPRIERARHG 312 (327)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHHCCSE-EEEESGGGGS-THHH------HSSGGGSGGGSCTTCCCCEEEECSCT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCE-EEEECHHHCC-HHHH------HHHHHHHHHHCCCCCCCCEEEECCCC
T ss_conf 07756679999999999999999999749998-9992703253-8899------99999999861465789989989978
Q ss_pred CCCHHHHHHHHHHC
Q ss_conf 87227759998738
Q gi|254780280|r 316 PYIAIAGMVSYIKM 329 (348)
Q Consensus 316 ~~agl~GAa~~~r~ 329 (348)
++++++|||.++-+
T Consensus 313 ~~a~l~GAa~lAl~ 326 (327)
T 2ap1_A 313 DAGGMRGAAFLHLT 326 (327)
T ss_dssp TTHHHHHHHHTTSC
T ss_pred CHHHHHHHHHHHHC
T ss_conf 85999999999836