HHsearch results for GI: 254780280 and protein with PDBid: 2qm1_A
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis V583}
Probab=100.00 E-value=4.4e-38 Score=252.00 Aligned_cols=297 Identities=19% Similarity=0.180 Sum_probs=213.4
Q ss_pred CCCCCEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCC-------HHHHHHHHHHHCC--CCCCCEEEEEEEEEEEC
Q ss_conf 66773799985751189999877998088999743887358-------8999999997223--45655469997304416
Q gi|254780280|r 10 PIAFPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDYEN-------LEHAIQEVIYRKI--SIRLRSAFLAIATPIGD 80 (348)
Q Consensus 10 ~~~~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~~~-------~~~~i~~~l~~~~--~~~~~~igi~v~Gpv~~ 80 (348)
-|..+||+||+||||++++++|. .+++....+.++...++ +.+.+.+++++.. ..++.++|+++||+++.
T Consensus 3 ~m~~~vLgiD~GgT~~~~~l~d~-~G~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~i~~igi~~~G~vd~ 81 (326)
T 2qm1_A 3 AMDKKIIGIDLGGTTIKFAILTT-DGVVQQKWSIETNILEDGKHIVPSIIESIRHRIDLYNMKKEDFVGIGMGTPGSVDI 81 (326)
T ss_dssp GGGCEEEEEEECSSEEEEEEEET-TCCEEEEEEEECCCTTTTTTHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESSEEET
T ss_pred CCCCEEEEEEECCCEEEEEEECC-CCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEC
T ss_conf 78985999998734289999939-99799999971798889899999999999999997157656713785224330506
Q ss_pred CC--EEEECCCCCCCC--HHHHHHHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEE
Q ss_conf 85--564213566669--88999982898558821265432000015865535302434557666752799317620224
Q gi|254780280|r 81 QK--SFTLTNYHWVID--PEELISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGI 156 (348)
Q Consensus 81 ~~--~~~~~~~~~~~~--~~~l~~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~ 156 (348)
.. ....+++.|... ..+........||.++||++|.+++|.+++ .......++++..|||+|.
T Consensus 82 ~~~~i~~~~~l~~~~~~~l~~~l~~~~~~~v~v~ND~~a~a~ae~~~g-------------~~~~~~~~~~i~~gtGig~ 148 (326)
T 2qm1_A 82 EKGTVVGAYNLNWTTVQPVKEQIESALGIPFALDNDANVAALGERWKG-------------AGENNPDVIFITLGTGVGG 148 (326)
T ss_dssp TTTEEECBGGGTBCSCBCHHHHHHHHHCSCEEEEEHHHHHHHHHHHHS-------------TTTTCSCEEEEEESSSEEE
T ss_pred CCCCEEEECCCCCCCCCHHHHHHHHHHCCCEEECCHHHHHHHHHHHHC-------------CCCCCCCEEEEECCCCEEE
T ss_conf 668076303567444433899999987998898565889999999828-------------8889997789962786388
Q ss_pred EEEECC--CCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCC-------
Q ss_conf 543105--88630113567866667661023478999985318986487752222389999999874088864-------
Q gi|254780280|r 157 SSVIRA--KDSWIPISCEGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESN------- 227 (348)
Q Consensus 157 ~~~~~~--~~g~~~~agE~Gh~~~~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~~l~~~~~~~~~------- 227 (348)
+++.++ ..|.+..++|+||+.+.+... .|.|+..+|+|.++|++++.+.++.+.........
T Consensus 149 ~~i~~g~~~~g~~g~~~~~G~~~~~~~g~---------~~~~~~~g~~e~~~S~~~l~~~~~~~~~~~~~~~~~~~~~~~ 219 (326)
T 2qm1_A 149 GIVAAGKLLHGVAGCAGEVGHVTVDPNGF---------DCTCGKRGCLETVSSATGVVRVARHLSEEFAGDSELKQAIDD 219 (326)
T ss_dssp EEEETTEECCCSSSCTTCGGGSBSCTTSC---------BCTTSSBCBTHHHHSHHHHHHHHHHHTTTCCSCCHHHHHHHH
T ss_pred EEEECCEECCCCCCCCCCCCCCEECCCCC---------CCCCCCCCCHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHCC
T ss_conf 99989861117998755024522368876---------554556774998726799999999874024762567764213
Q ss_pred -CCCC--HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHH
Q ss_conf -3698--8899883689579999999999999999999997489973899656776556772764899998837983788
Q gi|254780280|r 228 -KVLS--SKDIVSKSEDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKEL 304 (348)
Q Consensus 228 -~~~~--~~~~~~~~~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~ 304 (348)
.... ....+++.+|+.|.+++++++++|+..++++++.++|+. |||+|++......++ +.+++.+.+. .+...
T Consensus 220 ~~~~~~~~~~~~a~~gD~~a~~i~~~~~~~l~~~i~~l~~~l~p~~-vvl~G~~~~~~~~l~--~~l~~~~~~~-~~~~~ 295 (326)
T 2qm1_A 220 GQDVSSKDVFEFAEKGDHFALMVVDRVCFYLGLATGNLGNTLNPDS-VVIGGGVSAAGEFLR--SRVEKYFQEF-TFPQV 295 (326)
T ss_dssp TCCCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCSE-EEEEESGGGGTHHHH--HHHHHHHHHT-SCHHH
T ss_pred CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCE-EEEECHHHHCCHHHH--HHHHHHHHHH-CCCCC
T ss_conf 3200267789998717766899999988879999999999919998-999693672707899--9999999973-24134
Q ss_pred HHHCCEEEE-ECCCCHHHHHHHHHHCCCCC
Q ss_conf 973887999-57872277599987380012
Q gi|254780280|r 305 MRQIPTYVI-TNPYIAIAGMVSYIKMTDCF 333 (348)
Q Consensus 305 l~~ipv~~~-~~~~agl~GAa~~~r~~~~~ 333 (348)
...++|..+ .+++++++|||.++.+..++
T Consensus 296 ~~~~~i~~~~~~~~~~~~GAa~lal~~~~~ 325 (326)
T 2qm1_A 296 RNSTKIKLAELGNEAGVIGAASLALQFSKE 325 (326)
T ss_dssp HTTSEEEECSSGGGHHHHHHHHHGGGGCC-
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHHHCC
T ss_conf 789879988879838899999999998655