HHsearch results for GI: 254780280 and protein with PDBid: 3htv_A
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=100.00 E-value=3e-36 Score=240.62 Aligned_cols=278 Identities=17% Similarity=0.179 Sum_probs=187.6
Q ss_pred CCCEEEEEECCCCEEEEEEECCCCEEEEEEEECC--CCCCCHHHHHHHHHHHC---CCCCCCEEEEEEEEEEECCC--EE
Q ss_conf 7737999857511899998779980889997438--87358899999999722---34565546999730441685--56
Q gi|254780280|r 12 AFPVLLADIGGTNVRFAILRSMESEPEFCCTVQT--SDYENLEHAIQEVIYRK---ISIRLRSAFLAIATPIGDQK--SF 84 (348)
Q Consensus 12 ~~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t--~~~~~~~~~i~~~l~~~---~~~~~~~igi~v~Gpv~~~~--~~ 84 (348)
.-.|++||||||++|++++|.. +++....+.++ .+++++.+.+.+.+.+. ...++.++|||+||+|+... ..
T Consensus 6 ~~~v~GIDiGgt~i~~~l~d~~-g~i~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~i~gIgia~pG~vd~~~g~v~ 84 (310)
T 3htv_A 6 HNVVAGVDMGATHIRFCLRTAE-GETLHCEKKRTAEVIAPGLVSGIGEMIDEQLRRFNARCHGLVMGFPALVSKDKRTII 84 (310)
T ss_dssp EEEEEEEEECSSEEEEEEEETT-SCEEEEEEEEHHHHHTTCHHHHHHHHHHHHHHHHTEEEEEEEEEESSCBCTTSSCBC
T ss_pred CCEEEEEEECCCEEEEEEECCC-CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEECCCCEEE
T ss_conf 9899999976667999999299-989999996188878899999999999999987599730799982630867998499
Q ss_pred EECCCCC---C-CCH-HHHHHHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEE
Q ss_conf 4213566---6-698-8999982898558821265432000015865535302434557666752799317620224543
Q gi|254780280|r 85 TLTNYHW---V-IDP-EELISRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSV 159 (348)
Q Consensus 85 ~~~~~~~---~-~~~-~~l~~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~ 159 (348)
..++.+| . ++. ..+.+.++ .||.++||++|.++++.+. .......++++..|||+|.+++
T Consensus 85 ~~~~~~~~~~~~~~l~~~l~~~~~-~pv~i~ND~~aaa~~e~~~--------------~~~~~~~~~~i~~gtGiG~gii 149 (310)
T 3htv_A 85 STPNLPLTAADLYDLADKLENTLN-CPVEFSRDVNLQLSWDVVE--------------NRLTQQLVLAAYLGTGMGFAVW 149 (310)
T ss_dssp SCCSSSCCHHHHTTHHHHHHHHHT-SCEEEEEHHHHHHHHHHHH--------------TTCTTSCEEEEEESSSEEEEEE
T ss_pred ECCCCCCCCCCCCCHHHHHHHHHC-CCEEEECCHHHHHHHHHHH--------------CCCCCCEEEEEEECCCCCCCCC
T ss_conf 568778644447767999878629-8579955377777766540--------------3454665999984671355413
Q ss_pred ECCC--CCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHH-
Q ss_conf 1058--8630113567866667661023478999985318986487752222389999999874088864369888998-
Q gi|254780280|r 160 IRAK--DSWIPISCEGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIADGFESNKVLSSKDIV- 236 (348)
Q Consensus 160 ~~~~--~g~~~~agE~Gh~~~~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~~l~~~~~~~~~~~~~~~~~~- 236 (348)
.++. .|.+..+||+||+++.+... .|.|+..+|+|+++|+++|.+.|+.. .......++.
T Consensus 150 ~~g~i~~G~~g~aGEiGh~~~~~~~~---------~~~cg~~gc~e~~~S~~~l~~~~~~~--------~~~~~~~~~~~ 212 (310)
T 3htv_A 150 MNGAPWTGAHGVAGELGHIPLGDMTQ---------HCACGNPGCLETNCSGMALRRWYEQQ--------PRNYPLRDLFV 212 (310)
T ss_dssp ETTEEECCSSSCCCC------------------------------CCSSSHHHHHHHHTTS--------CCSSCGGGHHH
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCC---------CCCCCCCHHHHHHCCHHHHHHHHHHC--------CCCCCHHHHHH
T ss_conf 47864558765445454023579987---------45677511445532599999999753--------12352899997
Q ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHH-HHHCCEEEE-E
Q ss_conf 83689579999999999999999999997489973899656776556772764899998837983788-973887999-5
Q gi|254780280|r 237 SKSEDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKEL-MRQIPTYVI-T 314 (348)
Q Consensus 237 ~~~~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~-l~~ipv~~~-~ 314 (348)
....|+ +++.+.+++++.++|++++|+|+. |||||+++.. ..++ .+.+.+.+.+.. +..+ -+.++|..+ .
T Consensus 213 ~~~~~~----~~~~~~~~~~~~ia~li~~ldp~~-IVigG~i~~~-~~~~-~~~l~~~~~~~~-~~~~~~~~~~i~~s~~ 284 (310)
T 3htv_A 213 HAENAP----FVQSLLENAARAIATSINLFDPDA-VILGGGVMDM-PAFP-RETLVAMTQKYL-RRPLPHQVVRFIAASS 284 (310)
T ss_dssp HHTTCH----HHHHHHHHHHHHHHHHHHHHCCSE-EEEECTTTTS-TTCC-HHHHHHHHHHTS-CTTTTTTTCEEEECCC
T ss_pred HHHCCC----HHHHHHHHHHHHHHHHHHHCCCCE-EEEECHHHCC-HHHH-HHHHHHHHHHHH-CCCCCCCCCEEEECCC
T ss_conf 763360----554567789999998987518988-9980825506-4678-999999999985-2235767887998885
Q ss_pred CCCCHHHHHHHHHHCC
Q ss_conf 7872277599987380
Q gi|254780280|r 315 NPYIAIAGMVSYIKMT 330 (348)
Q Consensus 315 ~~~agl~GAa~~~r~~ 330 (348)
+++++++|||.++.++
T Consensus 285 ~~~~~~~GAA~la~~~ 300 (310)
T 3htv_A 285 SDFNGAQGAAILAHQR 300 (310)
T ss_dssp CTTHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
T ss_conf 7758899999999998