HHsearch results for GI: 254780280 and protein with PDBid: 3o8m_A

Probab=99.44  E-value=1.3e-09  Score=76.06  Aligned_cols=289  Identities=16%  Similarity=0.105  Sum_probs=152.4

Q ss_pred             EEEEEECCCCEEEEEEECCCCE-E-EEEEEE--CCC----CCCCHH----HHHHHHHHHCCC---CCCCEEEEEEEEEEE
Q ss_conf             7999857511899998779980-8-899974--388----735889----999999972234---565546999730441
Q gi|254780280|r   15 VLLADIGGTNVRFAILRSMESE-P-EFCCTV--QTS----DYENLE----HAIQEVIYRKIS---IRLRSAFLAIATPIG   79 (348)
Q Consensus        15 vL~iDIGGT~ir~glv~~~~~~-i-~~~~~~--~t~----~~~~~~----~~i~~~l~~~~~---~~~~~igi~v~Gpv~   79 (348)
                      .|++|+||||.|+++|+..+.. . ..++++  |..    .-+.|.    +.|.+++.+...   .+.-.+|+...=|+.
T Consensus        82 fLAlDlGGTN~Rv~~V~L~g~~~~~~~~~~~~ip~~~~~g~~~~lFd~iA~~i~~fl~~~~~~~~~~~l~lGfTFSFP~~  161 (485)
T 3o8m_A           82 FLALDLGGTNLRVVLVKLGGNHDFDTTQNKYRLPDHLRTGTSEQLWSFIAKCLKEFVDEWYPDGVSEPLPLGFTFSYPAS  161 (485)
T ss_dssp             EEEEEESSSEEEEEEEEEESSSCEEEEEEEEECCTTGGGSBHHHHHHHHHHHHHHHHHHHCTTCCSSCEEEEEEECSCEE
T ss_pred             EEEEEECCCCEEEEEEEECCCCCEEEEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCC
T ss_conf             99998279848999999889997688877876887873586589999999999999998544554661332367602234


Q ss_pred             C---CCEEEECCC-CC-------CCCHHHHH---HHHCC--CCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCC
Q ss_conf             6---855642135-66-------66988999---98289--855882126543200001586553530243455766675
Q gi|254780280|r   80 D---QKSFTLTNY-HW-------VIDPEELI---SRMQF--EDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFS  143 (348)
Q Consensus        80 ~---~~~~~~~~~-~~-------~~~~~~l~---~~~~~--~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~  143 (348)
                      -   +....+.+. .+       +....-|.   ++.+.  +.+.++||-.+.-.+.....                 ..
T Consensus       162 Q~~i~~g~Li~wtKgF~~~~v~G~dv~~lL~~Al~r~~~~v~v~aivNDTvgTL~a~ay~~-----------------~~  224 (485)
T 3o8m_A          162 QKKINSGVLQRWTKGFDIEGVEGHDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTD-----------------PQ  224 (485)
T ss_dssp             CSBTTCCEECCCCTTCCCBTCTTSBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHC-----------------TT
T ss_pred             CCCCCCEEEEECCCCEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHCCCC-----------------CC
T ss_conf             6789967998704741057867873689999999973999239999543499998644089-----------------99


Q ss_pred             CEEEECCCCEEEEEEEECC---------------CCCCEECCCCCCCCCC----CCCCHHHHHHHHHHHHHCCCCCCHHH
Q ss_conf             2799317620224543105---------------8863011356786666----76610234789999853189864877
Q gi|254780280|r  144 SRVIVGPGTGLGISSVIRA---------------KDSWIPISCEGGHMDI----GPSTQRDYEIFPHLTERAEGRLSAEN  204 (348)
Q Consensus       144 ~~~~ig~GtG~g~~~~~~~---------------~~g~~~~agE~Gh~~~----~~~~~~~~~~~~~l~~~~g~~~~~E~  204 (348)
                      ..+.+..|||.+.++.-+.               ..+...+-.|+|...-    .|.+.-+..+.+  .....+.-.+|.
T Consensus       225 ~~iGlIlGTGtNacY~e~~~~i~k~~~~~~~~~~~~~~miIN~EwG~F~~~~~~lp~T~~D~~lD~--~S~nPg~q~fEK  302 (485)
T 3o8m_A          225 TKMGIIIGTGVNGAYYDVVSGIEKLEGLLPEDIGPDSPMAINCEYGSFDNEHLVLPRTKYDVIIDE--ESPRPGQQAFEK  302 (485)
T ss_dssp             EEEEEEESSSEEEEEEEEGGGCGGGTTTCCTTSCTTCEEEEECCGGGTTTTCSSSCCCHHHHHHHH--HSSSTTSCHHHH
T ss_pred             CEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHH--CCCCCCCCCCHH
T ss_conf             449999757510489837104741036674446888728998555257998655778777877503--579999722113


Q ss_pred             HHCCHHHHHHHHHHHH----HC---CCCCCC------CCCHHHHH-----------------HHC-C-----------CH
Q ss_conf             5222238999999987----40---888643------69888998-----------------836-8-----------95
Q gi|254780280|r  205 LLSGKGLVNIYKALCI----AD---GFESNK------VLSSKDIV-----------------SKS-E-----------DP  242 (348)
Q Consensus       205 ~~SG~gl~~~y~~l~~----~~---~~~~~~------~~~~~~~~-----------------~~~-~-----------D~  242 (348)
                      .+||+.|..+.+...-    ..   .....+      .+...++.                 ... +           -.
T Consensus       303 miSG~YLGElvRlvl~~l~~~~~lF~~~~~~~l~~~~~l~t~~ls~ie~d~~~~~~~~~~~l~~~~~~~~t~~d~~~vr~  382 (485)
T 3o8m_A          303 MTSGYYLGEIMRLVLLDLYDSGFIFKDQDISKLKEAYVMDTSYPSKIEDDPFENLEDTDDLFKTNLNIETTVVERKLIRK  382 (485)
T ss_dssp             HHSTTTHHHHHHHHHHHHHHTTSSSTTSCCGGGGSTTCSCTHHHHHHHHCCCTTCHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_pred             HHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHH
T ss_conf             12023499999999999986155557888777727877665236777528885599999999863698899999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCC-EEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHH-------HHCCEEEEE
Q ss_conf             79999999999999999999997489973-8996567765567727648999988379837889-------738879995
Q gi|254780280|r  243 IALKAINLFCEYLGRVAGDLALIFMARGG-VYISGGIPYKIIDLLRNSSFRESFENKSPHKELM-------RQIPTYVIT  314 (348)
Q Consensus       243 ~A~~~~~~~~~~lg~~i~~l~~~~~p~~~-IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l-------~~ipv~~~~  314 (348)
                      +|..+.++.++..+.+++-++.-.+.+.. |-+-||+-.+.+      .|.+...+.  +++++       ...+|.+..
T Consensus       383 I~~~V~~RAA~L~Aa~iaai~~k~~~~~~~V~vDGSv~~~~p------~f~~~~~~~--l~~ll~~~~~~~~~~~v~l~~  454 (485)
T 3o8m_A          383 LAELVGTRAARLTVCGVSAICDKRGYKTAHIAADGSVFNRYP------GYKEKAAQA--LKDIYNWDVEKMEDHPIQLVA  454 (485)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTCSSEEEEEESHHHHHST------THHHHHHHH--HHHHHTCCCCSGGGCSEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEECCC------CHHHHHHHH--HHHHHHCCCCCCCCCCEEEEE
T ss_conf             999999879999999999999854998627999687232386------778999999--999862510126797479999


Q ss_pred             CCCCHHHHHHHHHHCC
Q ss_conf             7872277599987380
Q gi|254780280|r  315 NPYIAIAGMVSYIKMT  330 (348)
Q Consensus       315 ~~~agl~GAa~~~r~~  330 (348)
                      -+|...+|||-.|-..
T Consensus       455 ~~DGSg~GAAl~Aa~a  470 (485)
T 3o8m_A          455 AEDGSGVGAAIIACLT  470 (485)
T ss_dssp             CCCTTTHHHHHHHHHH
T ss_pred             ECCCCHHHHHHHHHHH
T ss_conf             1285299999999999