PSIBLAST alignment of GI: 254780280 and protein with PDB id: 1z05
>gi|62738865|pdb|1Z05|A Chain A, Crystal Structure Of The Rok Family Transcriptional Regulator, Homolog Of E.Coli Mlc Protein Length = 429
Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 45/249 (18%), Positives = 79/249 (31%), Gaps = 32/249 (12%)
Query: 50 NLEHAIQEVIYRKISIRLRSAFLAIATPIGDQKSFTLTNYHWVIDPEELISRMQF---ED 106
+E Q + R+ S + + + ++ L H+ + L +
Sbjct: 154 EIEEFFQTYAAQLD--RVTSIAITLPGLVNSEQGIVLQMPHYNVKNLALGPEIYKATGLP 211
Query: 107 VLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSW 166
V + ND A ALA S S + + G G GI R
Sbjct: 212 VFVANDTRAWALAEKLFGHSQ-----------DVDNSVLISIHHGLGAGIVLDGRVLQGR 260
Query: 167 IPISCEGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYKALCIA---DG 223
E GH+ I P + E + S + + + A A
Sbjct: 261 HGNIGELGHIQIDPQGK---------RCHCGNYGCLETVASSQAIRDQVTARIQAGEPSC 311
Query: 224 FESNKVLSSKDIVSKS--EDPIALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIPYK 281
+ + +S +DI + + DP+A+ I YLG + +F + GG+ +
Sbjct: 312 LATVEEISIEDICAAAADGDPLAVDVIQQLGRYLGAAIAIVINLFNPEK--ILIGGVINQ 369
Query: 282 IIDLLRNSS 290
+L S
Sbjct: 370 AKSILYPSI 378