HHsearch alignment for GI: 254780281 and conserved domain: COG1999
>COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems [General function prediction only].
Probab=100.00 E-value=8.4e-45 Score=291.23 Aligned_cols=163 Identities=38% Similarity=0.725 Sum_probs=151.7
Q ss_pred CCCCCCCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHC-CCCCCEEEEEEEECCCCCCHHHH
Q ss_conf 66667870798299979677884996799996047776544688887765554302-44333058876514333330577
Q gi|254780281|r 32 NRRFNSDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVD-PTGTLLNAYFITVDPKRDTPEVM 110 (201)
Q Consensus 32 ~~~~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~-~~~~~v~~v~IsvDP~rDt~e~l 110 (201)
T Consensus 43 ~~~~~g~f~l~d~~G~~~~~~~l~Gk~~lv~FgyT~CpdVCP~~l~~l~~~~~~l~~~~~~~v~vv~itvDPerDtp~~l 122 (207)
T COG1999 43 AVYIGGDFELTDQDGKPFTLKDLKGKPSLVFFGYTHCPDVCPTTLAELKALLKKLGEGEGDDVQVVFITVDPERDTPEVL 122 (207)
T ss_pred CCCCCCCEEEECCCCCEEECCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHH
T ss_conf 43237865788689988612356798899997556789747579999999999736434784899999879999989999
Q ss_pred HHHHH-HCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHH
Q ss_conf 77753-13686422458988989888860908862256556777752587420699985898299985789888999999
Q gi|254780281|r 111 KKFVQ-RFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEK 189 (201)
Q Consensus 111 ~~y~~-~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~ 189 (201)
T Consensus 123 k~Y~~~~~~~~~~~ltg~~~~~~~~~k~~~V~~~~v~~~~~---~~y~~~Hs~~~~lid~~G~~~~~~~~~~~~~~i~~~ 199 (207)
T COG1999 123 KKYAELNFDPRWIGLTGTPEQIEEVAKAYGVFYSKVPLDDS---QNYTIDHSAGFYLIDADGRFLGTYDYGEPPEEIAAD 199 (207)
T ss_pred HHHHCCCCCCCEEEEECCHHHHHHHHHHHCEEEEEECCCCC---CCCEEECCEEEEEECCCCEEEEEECCCCCHHHHHHH
T ss_conf 99732168888626508988999999961614565124777---762241440699988998299984589986999999
Q ss_pred HHHHHHHC
Q ss_conf 99998514
Q gi|254780281|r 190 INRLITYG 197 (201)
Q Consensus 190 i~~ll~~~ 197 (201)
T Consensus 200 l~~l~~~~ 207 (207)
T COG1999 200 LKKLLKER 207 (207)
T ss_pred HHHHHHCC
T ss_conf 99986369