HHsearch alignment for GI: 254780281 and conserved domain: cd00340
>cd00340 GSH_Peroxidase Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate. GSH peroxidase contains one selenocysteine residue per subunit, which is involved in catalysis. Different isoenzymes are known in mammals,which are involved in protection against reactive oxygen species, redox regulation of many metabolic processes, peroxinitrite scavenging, and modulation of inflammatory processes.
Probab=98.94 E-value=3.1e-08 Score=70.54 Aligned_cols=138 Identities=17% Similarity=0.222 Sum_probs=93.2
Q ss_pred CCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEC----CCCCCHHHHHH
Q ss_conf 87079829997967788499679999604777654468888776555430244333058876514----33333057777
Q gi|254780281|r 37 SDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVD----PKRDTPEVMKK 112 (201)
Q Consensus 37 ~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvD----P~rDt~e~l~~ 112 (201)
T Consensus 3 yd~~~~~idG~~~~l~~y~GkvvLiVNvAS~Cg-~t-~qy~~L~~L~~ky~~~g--l~Il~fPcnqFg~QEp~~~~eI~~ 78 (152)
T cd00340 3 YDFSVKDIDGEPVSLSKYKGKVLLIVNVASKCG-FT-PQYEGLEALYEKYKDRG--LVVLGFPCNQFGGQEPGSNEEIKE 78 (152)
T ss_pred CCEEEECCCCCEECHHHCCCCEEEEEECCCCCC-CC-CCHHHHHHHHHHHCCCC--EEEEEEEHHHHHCCCCCCHHHHHH
T ss_conf 113766799899458993997899996677888-87-24889999999841288--499963668861349997899999
Q ss_pred HHHH-CCCCEECC-----CCCH-HHHHHHHH-HCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHH
Q ss_conf 7531-36864224-----5898-89898888-609088622565567777525874206999858982999857898889
Q gi|254780281|r 113 FVQR-FSDRIIGI-----SGDP-IDVMRVAK-NFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSD 184 (201)
Q Consensus 113 y~~~-~~~~~~~l-----tg~~-~~i~~l~~-~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~ 184 (201)
T Consensus 79 f~~~~y~v~Fpv~~K~~VnG~~~hply~~Lk~~~~~~------~~~~i~WNF------~KfLid~~G~vv~rf~~~~~p~ 146 (152)
T cd00340 79 FCETNYGVTFPMFAKIDVNGENAHPLYKYLKEEAPGL------LGKDIKWNF------TKFLVDRDGEVVKRFAPTTDPE 146 (152)
T ss_pred HHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCC------CCCCCCCCC------EEEEECCCCCEEEEECCCCCHH
T ss_conf 9997068762227665067987688999999757988------789876213------8999989998998879999989
Q ss_pred HHHHHH
Q ss_conf 999999
Q gi|254780281|r 185 SAIEKI 190 (201)
Q Consensus 185 ~i~~~i 190 (201)
T Consensus 147 ~l~~~I 152 (152)
T cd00340 147 ELEKDI 152 (152)
T ss_pred HHHHCC
T ss_conf 996029