HHsearch alignment for GI: 254780281 and conserved domain: cd02956

>cd02956 ybbN ybbN protein family; ybbN is a hypothetical protein containing a redox-inactive TRX-like domain. Its gene has been sequenced from several gammaproteobacteria and actinobacteria.

Probab=97.81  E-value=0.00016  Score=48.13  Aligned_cols=85  Identities=19%  Similarity=0.240  Sum_probs=59.6

Q ss_pred             CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf             99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r   55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV  134 (201)
Q Consensus        55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l  134 (201)
T Consensus        11 ~~~PVlv~F~A~wC~-~C~~~~p~l~~~a~~~~---~~~~~~~vd~d---~~~-------------------------~l   58 (96)
T cd02956          11 TQVPVVVDFWAPRSP-PSKELLPLLERLAEEYQ---GQFVLAKVNCD---AQP-------------------------QI   58 (96)
T ss_pred             CCCCEEEEEECCCCH-HHHHHHHHHHHHHHHCC---CEEEEEEEECC---CCH-------------------------HH
T ss_conf             998099999889997-68998999999998556---52999998033---465-------------------------46


Q ss_pred             HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHH
Q ss_conf             88609088622565567777525874206999858982999857898889999999
Q gi|254780281|r  135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKI  190 (201)
Q Consensus       135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i  190 (201)
T Consensus        59 a~~~~V~------------------~~Pt~~~f-~~G~~v~~~~G~~~~~~l~~~l   95 (96)
T cd02956          59 AQQFGVQ------------------ALPTVYLF-AAGQPVDGFQGAQPEEQLRQML   95 (96)
T ss_pred             HHHCCCC------------------CCCEEEEE-ECCEEEEEEECCCCHHHHHHHH
T ss_conf             8767876------------------16838889-9999945771899999999976