HHsearch alignment for GI: 254780281 and conserved domain: cd02963
>cd02963 TRX_DnaJ TRX domain, DnaJ domain containing protein family; composed of uncharacterized proteins of about 500-800 amino acids, containing an N-terminal DnaJ domain followed by one redox active TRX domain. DnaJ is a member of the 40 kDa heat-shock protein (Hsp40) family of molecular chaperones, which regulate the activity of Hsp70s. TRX is involved in the redox regulation of many protein substrates through the reduction of disulfide bonds. TRX has been implicated to catalyse the reduction of Hsp33, a chaperone holdase that binds to unfolded protein intermediates. The presence of DnaJ and TRX domains in members of this family suggests that they could be involved in a redox-regulated chaperone network.
Probab=97.82 E-value=0.00014 Score=48.54 Aligned_cols=89 Identities=11% Similarity=0.218 Sum_probs=64.6
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
T Consensus 23 ~~kPvlV~F~A~WC~-pC~~l~P~~~~~a~ele~--~~v~~~~Vn~d--~~-~-------------------------~l 71 (111)
T cd02963 23 FKKPYLIKITSDWCF-SCIHIEPVWKEVIQELEP--LGVGIATVNAG--HE-R-------------------------RL 71 (111)
T ss_pred CCCCEEEEEECCCCH-HHHHHHHHHHHHHHHHCC--CCEEEEEEECC--CC-H-------------------------HH
T ss_conf 897399999997478-788650799999998345--75599999488--69-8-------------------------99
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHH
Q ss_conf 88609088622565567777525874206999858982999857898889999999999
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRL 193 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~l 193 (201)
T Consensus 72 a~~~gV~------------------siPtl~~~-~~G~~v~~~~G~~s~~~i~~Fi~kl 111 (111)
T cd02963 72 ARKLGAH------------------SVPAIVGI-INGQVTFYHDSSFTKQHVVDFVRKL 111 (111)
T ss_pred HHHCCCC------------------CCCEEEEE-ECCEEEEEECCCCCHHHHHHHHHHC
T ss_conf 9981998------------------68989999-9999988663767989999999739