HHsearch alignment for GI: 254780281 and conserved domain: cd02995
>cd02995 PDI_a_PDI_a'_C PDIa family, C-terminal TRX domain (a') subfamily; composed of the C-terminal redox active a' domains of PDI, ERp72, ERp57 (or ERp60) and EFP1. PDI, ERp72 and ERp57 are endoplasmic reticulum (ER)-resident eukaryotic proteins involved in oxidative protein folding. They are oxidases, catalyzing the formation of disulfide bonds of newly synthesized polypeptides in the ER. They also exhibit reductase activity in acting as isomerases to correct any non-native disulfide bonds, as well as chaperone activity to prevent protein aggregation and facilitate the folding of newly synthesized proteins. PDI and ERp57 have the abb'a' domain structure (where a and a' are redox active TRX domains while b and b' are redox inactive TRX-like domains). PDI also contains an acidic region (c domain) after the a' domain that is absent in ERp57. ERp72 has an additional a domain at the N-terminus (a"abb'a' domain structure). ERp57 interacts with the lectin chaperones, calnexin and calreticu
Probab=93.71 E-value=0.3 Score=28.42 Aligned_cols=44 Identities=16% Similarity=0.200 Sum_probs=33.6
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECC
Q ss_conf 996799996047776544688887765554302443330588765143
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDP 102 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP 102 (201)
T Consensus 17 ~~k~vlV~Fya~wC~-~C~~~~p~~~~la~~~~~~-~~v--~~~~vD~ 60 (104)
T cd02995 17 SDKDVLVEFYAPWCG-HCKALAPIYEELAEKLKGD-DNV--VIAKMDA 60 (104)
T ss_pred CCCCEEEEEECCCCC-CCCCCCCHHHHHHHHHCCC-CCE--EEEEEEC
T ss_conf 998599999799775-6421274499999995279-971--8999717