HHsearch alignment for GI: 254780281 and conserved domain: cd02997
>cd02997 PDI_a_PDIR PDIa family, PDIR subfamily; composed of proteins similar to human PDIR (for Protein Disulfide Isomerase Related). PDIR is composed of three redox active TRX (a) domains and an N-terminal redox inactive TRX-like (b) domain. Similar to PDI, it is involved in oxidative protein folding in the endoplasmic reticulum (ER) through its isomerase and chaperone activities. These activities are lower compared to PDI, probably due to PDIR acting only on a subset of proteins. PDIR is preferentially expressed in cells actively secreting proteins and its expression is induced by stress. Similar to PDI, the isomerase and chaperone activities of PDIR are independent; CXXC mutants lacking isomerase activity retain chaperone activity.
Probab=97.62 E-value=0.00022 Score=47.33 Aligned_cols=87 Identities=15% Similarity=0.235 Sum_probs=58.6
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
T Consensus 16 ~~~~vlV~FyA~WC~-~Ck~~~P~~~~~a~~~~~~~-~~~~~--~vd~~~~~~~------------------------~l 67 (104)
T cd02997 16 KEKHVLVMFYAPWCG-HCKKMKPEFTKAATELKEDG-KGVLA--AVDCTKPEHD------------------------AL 67 (104)
T ss_pred CCCCEEEEEECCCCH-HHCCCCCHHHHHHHHHHHCC-CEEEE--EEECCCCCCH------------------------HH
T ss_conf 699899999889981-11156764999999975558-87999--9975630078------------------------78
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHH
Q ss_conf 886090886225655677775258742069998589829998578988899999
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIE 188 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~ 188 (201)
T Consensus 68 ~~~~~V------------------~~~PTi~~f-~~G~~~~~y~G~r~~e~l~~ 102 (104)
T cd02997 68 KEEYNV------------------KGFPTFKYF-ENGKFVEKYEGERTAEDIIE 102 (104)
T ss_pred HHHCCC------------------CCCCEEEEE-ECCEEEEEEECCCCHHHHHH
T ss_conf 865464------------------558789999-89949677777889899996