HHsearch alignment for GI: 254780281 and conserved domain: cd02999
>cd02999 PDI_a_ERp44_like PDIa family, endoplasmic reticulum protein 44 (ERp44)-like subfamily; composed of uncharacterized PDI-like eukaryotic proteins containing only one redox active TRX (a) domain with a CXXS motif, similar to ERp44. CXXS is still a redox active motif; however, the mixed disulfide formed with the substrate is more stable than those formed by CXXC motif proteins. PDI-related proteins are usually involved in the oxidative protein folding in the ER by acting as catalysts and folding assistants. ERp44 is involved in thiol-mediated retention in the ER.
Probab=95.39 E-value=0.11 Score=31.05 Aligned_cols=82 Identities=12% Similarity=0.153 Sum_probs=52.1
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
T Consensus 17 ~~~~vlV~FYApWC~-hCk~l~P~~~~la~~~~~----~~~~--a~~---~~~~----------------------~~~l 64 (100)
T cd02999 17 REDYTAVLFYASWCP-FSASFRPHFNALSSMFPQ----IRHL--AIE---ESSI----------------------KPSL 64 (100)
T ss_pred CCCEEEEEEECCCCH-HHHHHHHHHHHHHHHCCC----CCEE--EEE---ECCC----------------------CHHH
T ss_conf 895299999978888-889871899999987899----8489--999---5457----------------------8667
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHH
Q ss_conf 886090886225655677775258742069998589829998578988899999
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIE 188 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~ 188 (201)
T Consensus 65 ~~~ygV~------------------g~PTi~lf-~~g~~~-~Y~G~Rt~~~l~~ 98 (100)
T cd02999 65 LSRYGVV------------------GFPTILLF-NSTPRV-RYNGTRTLDSLAA 98 (100)
T ss_pred HHHCCCC------------------CCCEEEEE-CCCCEE-CCCCCCCHHHHHH
T ss_conf 8746754------------------36579996-799660-4789989899985