HHsearch alignment for GI: 254780281 and conserved domain: cd03011
>cd03011 TlpA_like_ScsD_MtbDsbE TlpA-like family, suppressor for copper sensitivity D protein (ScsD) and actinobacterial DsbE homolog subfamily; composed of ScsD, the DsbE homolog of Mycobacterium tuberculosis (MtbDsbE) and similar proteins, all containing a redox-active CXXC motif. The Salmonella typhimurium ScsD is a thioredoxin-like protein which confers copper tolerance to copper-sensitive mutants of E. coli. MtbDsbE has been characterized as an oxidase in vitro, catalyzing the disulfide bond formation of substrates like hirudin. The reduced form of MtbDsbE is more stable than its oxidized form, consistent with an oxidase function. This is in contrast to the function of DsbE from gram-negative bacteria which is a specific reductase of apocytochrome c.
Probab=99.73 E-value=7.1e-17 Score=122.68 Aligned_cols=120 Identities=19% Similarity=0.246 Sum_probs=91.0
Q ss_pred CCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Q ss_conf 87079829997967788499679999604777654468888776555430244333058876514333330577777531
Q gi|254780281|r 37 SDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQR 116 (201)
Q Consensus 37 ~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~ 116 (201)
T Consensus 1 P~ftl~~ldG~~~~l~~~~Gk~vvl~FWAtWC~-pC~~e~P~l~~l~~~-------~~~v~v~~~--~~~~~~v~~f~~~ 70 (123)
T cd03011 1 PLFTATTLDGEQFDLESLSGKPVLVYFWATWCP-VCRFTSPTVNQLAAD-------YPVVSVALR--SGDDGAVARFMQK 70 (123)
T ss_pred CCEEEECCCCCEEEHHHHCCCEEEEEEECCCCC-CHHHHCHHHHHHHHH-------CCEEEEEEE--CCCHHHHHHHHHH
T ss_conf 961757799899848996999899999938781-365638338888733-------878878860--3868888877651
Q ss_pred CCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHH
Q ss_conf 368642245898898988886090886225655677775258742069998589829998578988899999
Q gi|254780281|r 117 FSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIE 188 (201)
Q Consensus 117 ~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~ 188 (201)
T Consensus 71 ~~~~fp~~~D~~~---~~~~~y~v------------------~~~Pt~~liD~~GiV~~~~-G~~~~~~~~~ 120 (123)
T cd03011 71 KGYGFPVINDPDG---VISARWGV------------------SVTPAIVIVDPGGIVFVTT-GVTSEWGLRL 120 (123)
T ss_pred CCCCCEEEECCCC---CHHHHCCC------------------CCCCEEEEEECCCEEEEEE-CCCCHHHHHH
T ss_conf 1887328988997---62654797------------------7167799991999899997-5799799998