HHsearch alignment for GI: 254780281 and conserved domain: pfam00085
>pfam00085 Thioredoxin Thioredoxin. Thioredoxins are small enzymes that participate in redox reactions, via the reversible oxidation of an active centre disulfide bond. Some members with only the active site are not separated from the noise.
Probab=97.56 E-value=0.00029 Score=46.55 Aligned_cols=87 Identities=17% Similarity=0.259 Sum_probs=59.5
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
T Consensus 17 ~~k~vlv~F~a~wC~-~C~~~~~~~~~~a~~~~~---~~~~~~vd~d---~~~-------------------------~~ 64 (104)
T pfam00085 17 SDKPVLVDFYAPWCG-PCKALAPEYEKLAQEYKD---DVKFAKVDAD---ENP-------------------------DL 64 (104)
T ss_pred CCCCEEEEEECCCCH-HHHHCCHHHHHHCCCCCC---CCCCCCCCCC---CCH-------------------------HH
T ss_conf 899499999899985-045107044442222211---0122001465---485-------------------------35
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHH
Q ss_conf 8860908862256556777752587420699985898299985789888999999999
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINR 192 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ 192 (201)
T Consensus 65 ~~~~~i~~------------------~Pti~~~-~~G~~v~~~~G~~~~e~l~~~i~~ 103 (104)
T pfam00085 65 ASEYGVRG------------------FPTIKFF-KNGKKVSDYVGARTKDDLVAFIKK 103 (104)
T ss_pred HHCCCCEE------------------CCEEEEE-ECCEEEEEEECCCCHHHHHHHHHH
T ss_conf 32479625------------------0908999-899598888789999999999973