HHsearch alignment for GI: 254780281 and conserved domain: pfam00578
>pfam00578 AhpC-TSA AhpC/TSA family. This family contains proteins related to alkyl hydroperoxide reductase (AhpC) and thiol specific antioxidant (TSA).
Probab=99.76 E-value=8.4e-18 Score=128.28 Aligned_cols=120 Identities=24% Similarity=0.279 Sum_probs=99.2
Q ss_pred CCCCCEEEECCCCCEECHHHHCCCEEEEEEECC-CCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHH
Q ss_conf 667870798299979677884996799996047-7765446888877655543024433305887651433333057777
Q gi|254780281|r 34 RFNSDVHLVAQDGTDFSLSSLYIKPSIVFFGFT-NCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKK 112 (201)
Q Consensus 34 ~~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T-~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~ 112 (201)
T Consensus 3 ~~aP~f~l~d~~G~~~~l~~~~gk~~vl~f~~~~wC~-~C~~~~~~l~~~~~~~~~~--~~~vv~is~----d~~~~~~~ 75 (124)
T pfam00578 3 DKAPDFELPDLDGKEVSLSDYKGKWVVLFFYPKDFTP-VCTTELPALADLYEEFKKL--GVEVLGVSV----DSPESHKK 75 (124)
T ss_pred CCCCCCEEECCCCCEEEHHHHCCCEEEEEEECCCCCC-CHHHHHHHHHHHHHHHHCC--CCEEEEECC----CCHHHHHH
T ss_conf 8998618798996998499989991999998899992-7299999998744323135--874667858----99999999
Q ss_pred HHHHCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEE
Q ss_conf 753136864224589889898888609088622565567777525874206999858982999
Q gi|254780281|r 113 FVQRFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVG 175 (201)
Q Consensus 113 y~~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~ 175 (201)
T Consensus 76 ~~~~~~~~~~~l~D~~~---~~~~~~gv~~~~------------~~~~~P~~~lID~~G~I~y 123 (124)
T pfam00578 76 FAEKLGLPFPLLSDPDG---EVARAYGVLNEE------------AGGALRTTFVIDPDGKIRY 123 (124)
T ss_pred HHHHHCCCCEEEEECCC---HHHHHCCCCCCC------------CCCEEEEEEEECCCCEEEE
T ss_conf 99985999479995974---999985998466------------7988248999989997987